Virulence-related regulatory network of Pseudomonas syringae

Jiadai Huang, Chunyan Yao, Yue Sun, Quanjiang Ji, Xin Deng*

*Corresponding author for this work

Research output: Journal Publications and ReviewsRGC 21 - Publication in refereed journalpeer-review

18 Citations (Scopus)
87 Downloads (CityUHK Scholars)

Abstract

Transcription factors (TFs) play important roles in regulating multiple biological processes by binding to promoter regions and regulating the global gene transcription levels. Pseudomonas syringae is a Gram-negative phytopathogenic bacterium harbouring 301 putative TFs in its genome, approximately 50 of which are responsible for virulence-related gene and pathway regulation. Over the past decades, RNA sequencing, chromatin immunoprecipitation sequencing, high-throughput systematic evolution of ligands by exponential enrichment, and other technologies have been applied to identify the functions of master regulators and their interactions in virulence-related pathways. This review summarises the recent advances in the regulatory networks of TFs involved in the type III secretion system (T3SS) and non-T3SS virulence-associated pathways, including motility, biofilm formation, quorum sensing, nucleotide-based secondary messengers, phytotoxins, siderophore production, and oxidative stress. Moreover, this review discusses the future perspectives in terms of TF-mediated pathogenesis mechanisms and provides novel insights that will help combat P. syringae infections based on the regulatory networks of TFs.© 2022 The Author(s). Published by Elsevier B.V. on behalf of Research Network of Computational and Structural Biotechnology.
Original languageEnglish
Pages (from-to)6259-6270
JournalComputational and Structural Biotechnology Journal
Volume20
Online published9 Nov 2022
DOIs
Publication statusPublished - 2022

Funding

This work was supported by General Research Fund of Hong Kong (11102720, 21103018, 11101619, and 11103221 to XD), National Natural Science Foundation of China (31870116 and 32172358 to XD), and Shenzhen Science and Technology Fund (JCYJ20210324134000002).

Research Keywords

  • Pseudomonas syringae
  • Regulatory networks
  • Transcription factors
  • Virulence

Publisher's Copyright Statement

  • This full text is made available under CC-BY-NC-ND 4.0. https://creativecommons.org/licenses/by-nc-nd/4.0/

RGC Funding Information

  • RGC-funded

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