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Structural Feature Extraction via Topological Data Analysis

  • Bingxu Wang (Co-first Author)
  • , Bin Feng (Co-first Author)
  • , Linpeng Lv
  • , Shunning Li*
  • , Feng Pan*
  • *Corresponding author for this work

Research output: Journal Publications and Reviews › RGC 21 - Publication in refereed journal › peer-review

Abstract

With the advancement of artificial intelligence models, the development of scientifically grounded and structurally appropriate feature extraction methods has become critical for machine learning-based structure prediction and materials design. In recent years, there has been growing dissatisfaction with inefficient empirical descriptors and black-box feature extraction processes that require extensive training. This article introduces a topological data analysis-based framework for extracting structural features of materials, offering an informative perspective on structure-property relationships and predictive strategies. Emphasis is placed on the predictive power and interpretability of topological features, highlighting their advantages in uncovering structure-property correlations and providing physical insights into material behavior. This approach establishes a mathematically rigorous and computationally efficient paradigm for the discovery and design of advanced materials, achieving up to 55% reduction in prediction error for defect-sensitive properties and a notable improvement in MOF gas uptake prediction accuracy (e.g., R2 from 0.74 to 0.85), thus demonstrating both theoretical clarity and practical performance.
© 2025 American Chemical Society
Original languageEnglish
Pages (from-to)8056-8067
Number of pages12
JournalThe Journal of Physical Chemistry Letters
Volume16
Issue number32
Online published31 Jul 2025
DOIs
Publication statusPublished - 14 Aug 2025

Funding

The authors acknowledge financial support from Guangdong Key Laboratory of Design and Calculation of New Energy Materials (No. 2017B030301013), the Basic and Applied Basic Research Foundation of Guangdong Province (2021B1515130002 and 2023A1515011391), and the Major Science and Technology Infrastructure Project of Material Genome Big-science Facilities Platform supported by Municipal Development and Reform Commission of Shenzhen.

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