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Structural conservation in the major facilitator superfamily as revealed by comparative modeling

  • Eyal Vardy
  • , Isaiah T. Arkin
  • , Kay E. Gottschalk
  • , H. Ronald Kaback
  • , Shimon Schuldiner

Research output: Journal Publications and ReviewsRGC 21 - Publication in refereed journalpeer-review

Abstract

The structures of membrane transporters are still mostly unsolved. Only recently, the first two high-resolution structures of transporters of the major facilitator superfamily (MFS) were published. Despite the low sequence similarity of the two proteins involved, lactose permease and glycerol-3-phosphate transporter, the reported structures are highly similar. This leads to the hypothesis that all members of the MFS share a similar structure, regardless of their low sequence identity. To test this hypothesis, we generated models of two other members of the MFS, the Tn10-encoded metal-tetracycline/H+ antiporter (TetAB) and the rat vesicular monoamine transporter (rVMAT2). The models are based on the two MFS structures and on experimental data. The models for both proteins are in good agreement with the data available and support the notion of a shared fold for all MFS proteins.
Copyright © 2004 The Protein Society
Original languageEnglish
Pages (from-to)1832-1840
JournalProtein Science
Volume13
Issue number7
DOIs
Publication statusPublished - Jul 2004
Externally publishedYes

Bibliographical note

Publication details (e.g. title, author(s), publication statuses and dates) are captured on an “AS IS” and “AS AVAILABLE” basis at the time of record harvesting from the data source. Suggestions for further amendments or supplementary information can be sent to [email protected].

Research Keywords

  • Drug resistance
  • Ion-coupled transporters
  • Membrane protein
  • NEM accessibility

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