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Source free domain adaptation for medical image segmentation with fourier style mining

Research output: Journal Publications and ReviewsRGC 21 - Publication in refereed journalpeer-review

Abstract

Unsupervised domain adaptation (UDA) aims to exploit the knowledge learned from a labeled source dataset to solve similar tasks in a new unlabeled target domain. Existing UDA techniques typically assume that samples from source and target domains are freely accessible during the training. However, it may be impractical to access source images due to privacy concerns, especially in medical imaging scenarios with the patient information. To tackle this issue, we devise a novel source free domain adaptation framework with fourier style mining, where only a well-trained source segmentation model is available for the adaptation to the target domain. Our framework is composed of two stages: a generation stage and an adaptation stage. In the generation stage, we design a Fourier Style Mining (FSM) generator to inverse source-like images through statistic information of the pretrained source model and mutual Fourier Transform. These generated source-like images can provide source data distribution and benefit the domain alignment. In the adaptation stage, we design a Contrastive Domain Distillation (CDD) module to achieve feature-level adaptation, including a domain distillation loss to transfer relation knowledge and a domain contrastive loss to narrow down the domain gap by a self-supervised paradigm. Besides, a Compact-Aware Domain Consistency (CADC) module is proposed to enhance consistency learning by filtering out noisy pseudo labels with shape compactness metric, thus achieving output-level adaptation. Extensive experiments on cross-device and cross-centre datasets are conducted for polyp and prostate segmentation, and our method delivers impressive performance compared with state-of-the-art domain adaptation methods. The source code is available at https://github.com/CityU-AIM-Group/SFDA-FSM.
Original languageEnglish
Article number102457
JournalMedical Image Analysis
Volume79
Online published12 Apr 2022
DOIs
Publication statusPublished - Jul 2022

Funding

This work was supported by Shenzhen-Hong Kong Innovation Circle Category D Project SGDX2019081623300177 (CityU 9240008) and Hong Kong Research Grants Council (RGC) General Research Fund 11211221 (CityU 9043152). We would like to thank Dr. Hu Jiancong from Department of Endoscopic Surgery, the Sixth Affiliated Hospital, Sun Yat-sen University for providing clinical knowledge for endoscopy disease diagnosis.

Research Keywords

  • Consistency Learning
  • Contrastive Domain Distillation
  • Fourier Style Mining
  • Source Free Domain Adaptation

RGC Funding Information

  • RGC-funded

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