Site-specific vibrational dynamics of the CD3ζ membrane peptide using heterodyned two-dimensional infrared photon echo spectroscopy

Prabuddha Mukherjee; Amber T. Krummel; Eric C. Fulmer; Itamar Kass; Isaiah T. Arkin; Martin T. Zanni

doi:10.1063/1.1718332

Site-specific vibrational dynamics of the CD3ζ membrane peptide using heterodyned two-dimensional infrared photon echo spectroscopy

Prabuddha Mukherjee
, Amber T. Krummel
, Eric C. Fulmer
, Itamar Kass
, Isaiah T. Arkin
, Martin T. Zanni

Research output: Journal Publications and Reviews › RGC 21 - Publication in refereed journal › peer-review

113 Citations (Scopus)

Abstract

The amide I vibrational dynamics of a 27 residue peptide in lipid vesicles that encompasses the transmembrane domain of the T-cell receptor CD3 ζ was studied using a heterodyned two-dimensional (2D IR) infrered spectroscopy. The amide I mode of the 49-Leucine residue was spectroscopically isolated using 1- ¹³C= ¹⁸O isotope labeling. The homogeneous and inhomogeneous linewidths of this mode was measured by fitting the 2D IR spectrum collected with a photon echo pulse sequence. The population relaxation time of the amide I band was also measured with a transient grating, which was found to contribute 9 cm ^-1 to the linewidth.
© 2004 American Institute of Physics

Original language	English
Pages (from-to)	10215-10224
Journal	Journal of Chemical Physics
Volume	120
Issue number	21
DOIs	https://doi.org/10.1063/1.1718332
Publication status	Published - 1 Jun 2004
Externally published	Yes

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Publication details (e.g. title, author(s), publication statuses and dates) are captured on an “AS IS” and “AS AVAILABLE” basis at the time of record harvesting from the data source. Suggestions for further amendments or supplementary information can be sent to [email protected].

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@article{446603d51dfc48848e177dea6a0ffa90,

title = "Site-specific vibrational dynamics of the CD3ζ membrane peptide using heterodyned two-dimensional infrared photon echo spectroscopy",

abstract = "The amide I vibrational dynamics of a 27 residue peptide in lipid vesicles that encompasses the transmembrane domain of the T-cell receptor CD3 ζ was studied using a heterodyned two-dimensional (2D IR) infrered spectroscopy. The amide I mode of the 49-Leucine residue was spectroscopically isolated using 1- 13C= 18O isotope labeling. The homogeneous and inhomogeneous linewidths of this mode was measured by fitting the 2D IR spectrum collected with a photon echo pulse sequence. The population relaxation time of the amide I band was also measured with a transient grating, which was found to contribute 9 cm -1 to the linewidth. {\textcopyright} 2004 American Institute of Physics",

author = "Prabuddha Mukherjee and Krummel, \{Amber T.\} and Fulmer, \{Eric C.\} and Itamar Kass and Arkin, \{Isaiah T.\} and Zanni, \{Martin T.\}",

note = "Publication details (e.g. title, author(s), publication statuses and dates) are captured on an “AS IS” and “AS AVAILABLE” basis at the time of record harvesting from the data source. Suggestions for further amendments or supplementary information can be sent to [email protected].",

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volume = "120",

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Site-specific vibrational dynamics of the CD3ζ membrane peptide using heterodyned two-dimensional infrared photon echo spectroscopy. / Mukherjee, Prabuddha; Krummel, Amber T.; Fulmer, Eric C. et al.
In: Journal of Chemical Physics, Vol. 120, No. 21, 01.06.2004, p. 10215-10224.

Research output: Journal Publications and Reviews › RGC 21 - Publication in refereed journal › peer-review

TY - JOUR

T1 - Site-specific vibrational dynamics of the CD3ζ membrane peptide using heterodyned two-dimensional infrared photon echo spectroscopy

AU - Mukherjee, Prabuddha

AU - Krummel, Amber T.

AU - Fulmer, Eric C.

AU - Kass, Itamar

AU - Arkin, Isaiah T.

AU - Zanni, Martin T.

N1 - Publication details (e.g. title, author(s), publication statuses and dates) are captured on an “AS IS” and “AS AVAILABLE” basis at the time of record harvesting from the data source. Suggestions for further amendments or supplementary information can be sent to [email protected].

PY - 2004/6/1

Y1 - 2004/6/1

N2 - The amide I vibrational dynamics of a 27 residue peptide in lipid vesicles that encompasses the transmembrane domain of the T-cell receptor CD3 ζ was studied using a heterodyned two-dimensional (2D IR) infrered spectroscopy. The amide I mode of the 49-Leucine residue was spectroscopically isolated using 1- 13C= 18O isotope labeling. The homogeneous and inhomogeneous linewidths of this mode was measured by fitting the 2D IR spectrum collected with a photon echo pulse sequence. The population relaxation time of the amide I band was also measured with a transient grating, which was found to contribute 9 cm -1 to the linewidth. © 2004 American Institute of Physics

AB - The amide I vibrational dynamics of a 27 residue peptide in lipid vesicles that encompasses the transmembrane domain of the T-cell receptor CD3 ζ was studied using a heterodyned two-dimensional (2D IR) infrered spectroscopy. The amide I mode of the 49-Leucine residue was spectroscopically isolated using 1- 13C= 18O isotope labeling. The homogeneous and inhomogeneous linewidths of this mode was measured by fitting the 2D IR spectrum collected with a photon echo pulse sequence. The population relaxation time of the amide I band was also measured with a transient grating, which was found to contribute 9 cm -1 to the linewidth. © 2004 American Institute of Physics

UR - https://www.scopus.com/pages/publications/2942637980

UR - https://www.scopus.com/pages/publications/2942637980#tab=impact

U2 - 10.1063/1.1718332

DO - 10.1063/1.1718332

M3 - RGC 21 - Publication in refereed journal

C2 - 15268045

SN - 0021-9606

VL - 120

SP - 10215

EP - 10224

JO - Journal of Chemical Physics

JF - Journal of Chemical Physics

IS - 21

ER -

Site-specific vibrational dynamics of the CD3ζ membrane peptide using heterodyned two-dimensional infrared photon echo spectroscopy

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