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Reprogramming RiPP Scaffolds through Skeletal Editing Unlocks Chemical Space

  • Hiroshige Ogawa (Co-first Author)
  • , Longhui Yu (Co-first Author)
  • , Shangzhao Li
  • , Yuuya Nagata
  • , Tsz Ki Chan
  • , Yudai Matsuda
  • , Jing Liu
  • , Yong-Xin Li
  • , Hugh Nakamura

Research output: Journal Publications and ReviewsRGC 21 - Publication in refereed journalpeer-review

1 Downloads (CityUHK Scholars)

Abstract

In this study, we report (1) a scalable, systematic, and general synthetic approach for the supply of ribosomally synthesized and post-translationally modified peptides (RiPPs) bearing Tyr-Trp cross-linkages, and (2) the comprehensive expansion of novel chemical space through their skeletal diversification. In recent years, numerous biaryl-containing peptides have been discovered, and some of these RiPPs exhibit potent biological activities. However, despite the high metabolic stability and strong target protein binding generally attributed to biaryl RiPPs, their significant strain and rigidity have limited the availability of general synthetic methods. Here, we demonstrate the high versatility of modular synthetic strategies for the construction of RiPPs and achieve the synthesis of a variety of RiPPs containing Tyr-Trp cross-linkages. Furthermore, skeletal diversification via scaffold hopping enables access to artificial RiPP scaffolds incorporating quinazoline and quinoline motifs, whose preparation has previously been challenging. © The Royal Society of Chemistry
Original languageEnglish
Pages (from-to)13835–13849
JournalChemical Science
Volume17
Issue number28
Online published26 May 2026
DOIs
Publication statusPublished - Jul 2026

Bibliographical note

Research Unit(s) information for this publication is provided by the author(s) concerned.

Funding

Financial support for this work was provided by the Research Grants Council of the Hong Kong SAR, China (ECS Project No. 26302024; GRF Project No. 16306525), the National Natural Science Foundation of China (NSFC Project No. NSFC25SC26), and start-up funds from the Hong Kong University of Science and Technology (Project No. R9820) to H.N. This work was partly supported by JSPS KAKENHI Grant Number JP23H03810, JST-ERATO (JPMJER1903), the Institute for Chemical Reaction Design and Discovery (ICReDD), which was established by the World Premier International Research Initiative (WPI), MEXT, Japan (Y.N.), and the Research Enhancement Grant from City University of Hong Kong (Project No. 7020157) to Y.M. The computation was performed using Research Center for Computational Science, Japan (Project: 23-IMS-C119, Y.N.)

Publisher's Copyright Statement

  • This full text is made available under CC-BY 4.0. https://creativecommons.org/licenses/by/4.0/

RGC Funding Information

  • RGC-funded

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