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Molecular Subtyping and Prognostic Assessment Based on Tumor Mutation Burden in Patients with Lung Adenocarcinomas

  • Changzheng Wang
  • , Han Liang
  • , Cong Lin
  • , Fuqiang Li
  • , Guoyun Xie
  • , Sitan Qiao
  • , Xuliang Shi
  • , Jianlian Deng
  • , Xin Zhao
  • , Kui Wu
  • , Xiuqing Zhang*
  • *Corresponding author for this work

Research output: Journal Publications and Reviews › RGC 21 - Publication in refereed journal › peer-review

40 Downloads (CityUHK Scholars)

Abstract

The distinct molecular subtypes of lung cancer are defined by monogenic biomarkers, such as EGFR, KRAS, and ALK rearrangement. Tumor mutation burden (TMB) is a potential biomarker for response to immunotherapy, which is one of the measures for genomic instability. The molecular subtyping based on TMB has not been well characterized in lung adenocarcinomas in the Chinese population. Here we performed molecular subtyping based on TMB with the published whole exome sequencing data of 101 lung adenocarcinomas and compared the different features of the classified subtypes, including clinical features, somatic driver genes, and mutational signatures. We found that patients with lower TMB have a longer disease-free survival, and higher TMB is associated with smoking and aging. Analysis of somatic driver genes and mutational signatures demonstrates a significant association between somatic RYR2 mutations and the subtype with higher TMB. Molecular subtyping based on TMB is a potential prognostic marker for lung adenocarcinoma. Signature 4 and the mutation of RYR2 are highlighted in the TMB-High group. The mutation of RYR2 is a significant biomarker associated with high TMB in lung adenocarcinoma.
Original languageEnglish
JournalInternational Journal of Molecular Sciences
Volume20
Issue number17
Online published30 Aug 2019
DOIs
Publication statusPublished - Sept 2019
Externally publishedYes

UN SDGs

This output contributes to the following UN Sustainable Development Goals (SDGs)

  1. SDG 3 - Good Health and Well-being
    SDG 3 Good Health and Well-being

Research Keywords

  • Tumor mutation burden
  • molecular subtype
  • lung adenocarcinomas
  • RYR2

Publisher's Copyright Statement

  • This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license.

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