Skip to main navigation Skip to search Skip to main content

Improved Mask R-CNN with Attention U-Net Feature Extractor for Pronucleus Instance Segmentation in Fertilized Egg Embryo

  • Yang Zhao
  • , Zikang Cai
  • , Xudong Li
  • , Ni Zeng
  • , Xiaomei Kang
  • , Shiqi Wang
  • , Jihong Pei*
  • , Xuan Yang
  • , Jiahui Wu
  • *Corresponding author for this work

Research output: Chapters, Conference Papers, Creative and Literary WorksRGC 32 - Refereed conference paper (with host publication)peer-review

Abstract

The pronucleus is the nucleus that formed in the fertilized egg embryo during the early stage following the fusion of the oocyte and sperm nuclei. The presence of pronucleus is a crucial indicator of successful fertilization. Among assisted reproductive technology, the intelligent detection of the pronucleus is essential for assessing embryo quality and for subsequent clinical analysis. The minimal contrast between pronucleus and the cytoplasmic background, along with numerous extraneous artifacts, poses a challenge for pronucleus instance segmentation. This paper proposes an improved mask R-CNN with attention U-Net feature extractor (AUM-R-CNN) for pronucleus instance segmentation, featuring a cell-guided region attention U-Net and a context-driven object relation detection head. As a feature extractor, the improved U-Net architecture is enhanced by the cell-guided region attention branch. This feature extractor focuses on the cytoplasmic region to promote feature extraction of pronucleus. The object relation detection head performs joint inference on proposals, introducing contextual relational information. This enhances the semantic consistency pronuclear proposals features, reducing the interference of other target objects in the cytoplasm. Furthermore, data augmentation techniques for pronuclear stage embryo images address limited training data. Experimental results show that the proposed AUM-R-CNN can achieve better performance on pronucleus instance segmentation tasks in the embryo images than the existing state-of-the-art methods. Particularly, the AUM-R-CNN demonstrates superior performance in complex scenarios with overlapping pronucleus and dynamic cytoplasmic environments. © 2025 IEEE.
Original languageEnglish
Title of host publicationProceedings - 2025 IEEE International Conference on Bioinformatics and Biomedicine, BIBM 2025
PublisherIEEE
Pages4477-4482
ISBN (Electronic)9798331515577
ISBN (Print)979-8-3315-1558-4
DOIs
Publication statusPublished - Dec 2025
Event2025 IEEE International Conference on Bioinformatics and Biomedicine (BIBM 2025) - Wuhan, China
Duration: 15 Dec 202518 Dec 2025

Publication series

NameProceedings - IEEE International Conference on Bioinformatics and Biomedicine, BIBM 
ISSN (Print)2156-1125
ISSN (Electronic)2156-1133

Conference

Conference2025 IEEE International Conference on Bioinformatics and Biomedicine (BIBM 2025)
PlaceChina
CityWuhan
Period15/12/2518/12/25

Funding

This work was supported in part by the National Natural Science Foundation of China (62201355), Guangdong Basic and Applied Basic Research Foundation (2024A1515010977, 2025A1515060013), Scientific Foundation for Youth Scholars of Shenzhen University, Guangdong Provincial Key Laboratory (2023B1212060076, 2017B030314073).

Research Keywords

  • assisted reproductive technology
  • attention U-Net
  • improved mask R-CNN
  • medical image analysis
  • Pronucleus instance segmentation

Fingerprint

Dive into the research topics of 'Improved Mask R-CNN with Attention U-Net Feature Extractor for Pronucleus Instance Segmentation in Fertilized Egg Embryo'. Together they form a unique fingerprint.

Cite this