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High-Throughput Single-Cell Biochip System for Functional Interrogation of Protein Interactions in Living Cells

  • Feng Liu (Co-first Author)
  • , Chengbao Wu (Co-first Author)
  • , Chaojuan Yang (Co-first Author)
  • , Yihang Tong (Co-first Author)
  • , Chengzheng Tai
  • , Hong Sun
  • , Liye Liu
  • , Mengyu Du
  • , Jiawen Zhu
  • , Ruowen Zhang
  • , Honglin Chen
  • , Desheng Yu
  • , Jing Zhang*
  • , Lingqian Chang*
  • , Yanli Jiao*
  • , Zaizai Dong*
  • *Corresponding author for this work

Research output: Journal Publications and ReviewsRGC 21 - Publication in refereed journalpeer-review

Abstract

In live cells, investigating protein–protein interactions (PPIs) with single-cell resolution provides critical insights into endogenous regulatory mechanisms underlying heterogeneous cellular behaviors, such as migration and proliferation. Conventional live-cell PPI detection techniques, which rely on the delivery of high-molecular-weight fluorescent protein-tagged plasmids into large cell populations, are constrained by low delivery efficiency and inadequate single-cell analytical capability. To address these, we report “Pixar,” for protein interaction examination and real-time behavior monitoring. This platform enables efficient PPI detection in living cells through focused electric field-based delivery of peptide-tagged protein plasmids and specific probes (both delivery efficiency and cell viability > 90%), avoiding the steric interference associated with conventional bulky labeling approaches. Its high-throughput single-cell capture array allows for the dynamic profiling of the tumor-associated AKT-mTOR protein interaction in regulating heterogeneous cell migration and proliferation across thousands of individual cells. The Pixar system establishes a versatile strategy for exploring protein function and cellular behavioral phenotypes with single-cell precision. © 2026 Wiley-VCH GmbH.
Original languageEnglish
Article numbere73336
JournalSmall
Online published7 Apr 2026
DOIs
Publication statusOnline published - 7 Apr 2026

Funding

This work was supported by the following fundings: National Natural Science Foundation of China (Nos. 22304006, T25B2018, 62471021, T24B2006), National Key R&D Program of China (Nos. 2023YFC2415900, 2022YFB3205601, 2022YFB3205602), Shandong Provincial Natural Science Foundation (ZR2024QB014, ZR2024QF010, ZR2025QC680), National Science Fund for Distinguished Young Scholars (No. T2425021), theFundamental Research Funds for the Central Universities (JKF-20240574, JFK-2025067053421, JKF-2025071003351, JKF-2025059184410).

Research Keywords

  • biochip
  • DNA probe
  • electroporation
  • protein interaction
  • single-cell analysis

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