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Extraction of semantic features of histological images for content-based retrieval of images

  • Lilian H. Tang
  • , Rudolf Hanka
  • , Horace H S Ip
  • , Ringo Lam

Research output: Journal Publications and ReviewsRGC 22 - Publication in policy or professional journal

Abstract

This paper presents an approach for automatically assign histologically meaningful (semantic) labels to tissue slide images. This approach is implemented as part of a larger system, I-Browse, which combines iconic and semantic content for intelligent image browsing. Our approach partitioned an input image into a number of subimages. A set of texture features based on Gabor filterings and colour histograms which capture the visual characteristics of each of the subimages were computed. These image feature measurements then form the input to a pattern classifier which gives an initial coarse label assignment to subimages based on an hierarchical clustering of these image features. To facilitate supervised training of the classifier, a knowledge elicitation tool was developed which allows a histopathologist to assign histological terms to a sample of sub-images obtained from digitised tissue images. The initial labels and their spatial distribution were then analysed by a semantic analyser with the help of a knowledge base which contains prior knowledge of the expected visual appearance of histological images of an organ. The label assigned to the subimages were successive refined through a process of relevant feedback.
Original languageEnglish
Pages (from-to)360-368
JournalProceedings of SPIE - The International Society for Optical Engineering
Volume3662
Publication statusPublished - 1999
EventProceedings of the 1999 Medical Imaging - PACS Design and Evaluation Engineering and Clinical Issues - San Diego, CA, USA
Duration: 23 Jan 199925 Jan 1999

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