Center and distinguisher for strings with unbounded alphabet
Research output: Journal Publications and Reviews (RGC: 21, 22, 62) › 21_Publication in refereed journal › peer-review
Author(s)
Related Research Unit(s)
Detail(s)
Original language | English |
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Pages (from-to) | 383-400 |
Journal / Publication | Journal of Combinatorial Optimization |
Volume | 6 |
Issue number | 4 |
Publication status | Published - Dec 2002 |
Link(s)
Abstract
Consider two sets B and G of strings of length L with characters from an unbounded alphabet Σ, i.e., the size of Σ is not bounded by a constant and has to be taken into consideration as a parameter for input size. A closest string s* of B is a string that minimizes the maximum of Hamming1 distance(s, s*) over all string s : s ∈ B. In contrast, a farthest string t* from G maximizes the minimum of Hamming distance(t*, t) over all elements t : t ∈ G. A distinguisher of B from G is a string that is close to every string in B and far away from any string in G. We obtain polynomial time approximation schemes to settle the above problems.
Research Area(s)
- Approximation algorithm, Center string selection, Computational molecular biology, Distinguishing string selection, Unbounded alphabet size
Citation Format(s)
Center and distinguisher for strings with unbounded alphabet. / Deng, Xiaotie; Li, Guojun; Wang, Lusheng.
In: Journal of Combinatorial Optimization, Vol. 6, No. 4, 12.2002, p. 383-400.Research output: Journal Publications and Reviews (RGC: 21, 22, 62) › 21_Publication in refereed journal › peer-review