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An Alignment and Imputation Network (AINet) for Breast Cancer Diagnosis with Multimodal Multi-view Ultrasound Images

  • Haoyuan Chen
  • , Yonghao Li
  • , Jiadong Zhang
  • , Long Yang
  • , Yiqun Sun
  • , Yaling Chen*
  • , Shichong Zhou*
  • , Zhenhui Li*
  • , Xuejun Qian*
  • , Qi Xu*
  • , Dinggang Shen*
  • *Corresponding author for this work

Research output: Journal Publications and ReviewsRGC 21 - Publication in refereed journalpeer-review

Abstract

Recently, numerous deep learning models have been proposed for breast cancer diagnosis using multimodal multi-view ultrasound images. However, their performance could be highly affected by overlooking interactions between different modalities and views. Moreover, existing methods struggle to handle cases where certain modalities or views are missing, which limits their clinical applications. To address these issues, we propose a novel Alignment and Imputation Network (AINet) by integrating 1) alignment and imputation pre-training, and 2) hierarchical fusion fine-tuning. Specifically, in the pre-training stage, cross-modal contrastive learning is employed to align features across different modalities, for effectively capturing inter-modal interactions. To simulate missing modality (view) scenarios, we randomly mask out features and then impute them by leveraging inter-modal and inter-view relationships. Following the clinical diagnosis procedure, the subsequent fine-tuning stage further incorporates modality-level and view-level fusion in a hierarchical manner. The proposed AINet is developed and evaluated on three datasets, comprising 15,223 subjects in total. Experimental results demonstrate that AINet significantly outperforms state-of-the-art methods, particularly in handling missing modalities (views). This highlights its robustness and potential for real-world clinical applications. © 2025 IEEE.
Original languageEnglish
Number of pages12
JournalIEEE Transactions on Medical Imaging
DOIs
Publication statusOnline published - 24 Oct 2025

Funding

This work was supported in part by National Natural Science Foundation of China (grant numbers U23A20295, 62131015, 82441023, 82202160), the China Ministry of Science and Technology (STI2030-Major Projects-2022ZD0209000, STI2030-Major Projects-2022ZD0213100), Shanghai Municipal Central Guided Local Science and Technology Development Fund (grant number YDZX20233100001001), the Key R&D Program of Guangdong Province, China (grant number 2023B0303040001), and HPC Platform of ShanghaiTech University.

UN SDGs

This output contributes to the following UN Sustainable Development Goals (SDGs)

  1. SDG 3 - Good Health and Well-being
    SDG 3 Good Health and Well-being

Research Keywords

  • Breast cancer diagnosis
  • missing feature imputation
  • multimodal alignment
  • ultrasound imaging

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