Abstract
The COVID-19 pandemic has emphasized the need for novel drug discovery process. However, the journey from conceptualizing a drug to its eventual implementation in clinical settings is a long, complex, and expensive process, with many potential points of failure. Over the past decade, a vast growth in medical information has coincided with advances in computational hardware (cloud computing, GPUs, and TPUs) and the rise of deep learning. Medical data generated from large molecular screening profiles, personal health or pathology records, and public health organizations could benefit from analysis by Artificial Intelligence (AI) approaches to speed up and prevent failures in the drug discovery pipeline. We present applications of AI at various stages of drug discovery pipelines, including the inherently computational approaches of de novo design and prediction of a drug’s likely properties. Open-source databases and AI-based software tools that facilitate drug design are discussed along with their associated problems of molecule representation, data collection, complexity, labeling, and disparities among labels. How contemporary AI methods, such as graph neural networks, reinforcement learning, and generated models, along with structure-based methods, (i.e., molecular dynamics simulations and molecular docking) can contribute to drug discovery applications and analysis of drug responses is also explored. Finally, recent developments and investments in AI-based start-up companies for biotechnology, drug design and their current progress, hopes and promotions are discussed in this article. © 2023 The Author(s). Published by Elsevier Ltd.
| Original language | English |
|---|---|
| Article number | e17575 |
| Number of pages | 23 |
| Journal | Heliyon |
| Volume | 9 |
| Issue number | 7 |
| Online published | 26 Jun 2023 |
| DOIs | |
| Publication status | Published - Jul 2023 |
Funding
This work is supported by Hong Kong Innovation and Technology Commission (InnoHK Project CIMDA), Hong Kong Research Grants Council (Project 11204821), College of Science and Engineering, Hamad Bin Khalifa University, Doha, Qatar, and Qatar National Research Fund (QNRF) Grant TDF 03-1206-210011 and RRC02-0805-210019 to Tanvir Alam.
Research Keywords
- Artificial intelligence
- Graph neural networks
- Drug discovery
- Molecular dynamics simulation
- Biotechnology and bioengineering
- Biotechnology
- Molecule representation
- Reinforcement learning
Publisher's Copyright Statement
- This full text is made available under CC-BY 4.0. https://creativecommons.org/licenses/by/4.0/
RGC Funding Information
- RGC-funded
Policy Impact
- Cited in Policy Documents
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GRF: Matching Large Feature Sets based on Hypergraph Models and Structurally Adaptive CUR Decompositions of Compatibility Tensors
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