Accurate 3D PSF estimation from a wide-field microscopy image

Jizhou Li, Feng Xue, Thierry Blu

Research output: Chapters, Conference Papers, Creative and Literary WorksRGC 32 - Refereed conference paper (with host publication)peer-review

5 Citations (Scopus)

Abstract

The 3D point-spread function (PSF) plays a fundamental role in wide-field fluorescence microscopy. An accurate PSF estimation can significantly improve the performance of deconvolution algorithms. In this work, we propose a calibration-free method to obtain the PSF directly from the image obtained. Specifically, we first parametrize the spherically aberrated PSF as a linear combination of few basis functions. The coefficients of these basis functions are then obtained iteratively by minimizing a novel criterion, which is derived from the mixed Poisson-Gaussian noise statistics. Experiments demonstrate that the proposed approach results in highly accurate PSF estimations.

Original languageEnglish
Title of host publication2018 IEEE 15th International Symposium on Biomedical Imaging (ISBI 2018)
PublisherIEEE
Pages501-504
ISBN (Electronic)978-1-5386-3636-7
ISBN (Print)978-1-5386-3637-4
DOIs
Publication statusPublished - 2018
Externally publishedYes
Event15th IEEE International Symposium on Biomedical Imaging, ISBI 2018 - Washington, United States
Duration: 4 Apr 20187 Apr 2018

Publication series

NameProceedings - International Symposium on Biomedical Imaging
ISSN (Print)1945-7928
ISSN (Electronic)1945-8452

Conference

Conference15th IEEE International Symposium on Biomedical Imaging, ISBI 2018
Country/TerritoryUnited States
CityWashington
Period4/04/187/04/18

Funding

This work was supported by grants from the Research Grants Council (RGC) of Hong Kong (AoE/M-05/12).

Research Keywords

  • 3D deconvolution microscopy
  • Parametric PSF estimation
  • Point-spread function
  • Wide-field microscopy

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