Dr. ZHAO Zicheng (趙梓丞)

Research Output

  1. 2023
  2. Published

    Protocol to analyze population structure and migration history based on human genome variation data

    Zhao, Z., Wang, Y., Zhang, Z. & Li, S. C., 17 Mar 2023, In: STAR Protocols. 4, 1, 101928.

    Research output: Journal Publications and Reviews (RGC: 21, 22, 62)21_Publication in refereed journalpeer-review

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  3. 2022
  4. Published

    Over-shedding of donor-derived cell-free DNA at immune-related regions into plasma of lung transplant recipient

    Luo, J., Liu, L., Chen, L., Xu, X., Wang, Y., Wei, B., Ju, C., & 16 othersWang, X., Huang, L., Zeng, W., Miao, X., Sang, L., Huang, D., Pan, G., Peng, G., Chen, Z., Zhao, Z., Yang, C., Cui, W., Jiang, W., Xu, J., Li, S. C. & He, J., Jan 2022, In: Clinical and Translational Medicine. 12, 1, e622.

    Research output: Journal Publications and Reviews (RGC: 21, 22, 62)21_Publication in refereed journalpeer-review

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  5. Published

    eSMC: a statistical model to infer admixture events from individual genomics data

    Wang, Y., Zhao, Z., Miao, X., Wang, Y., Qian, X., Chen, L., Wang, C., & 1 othersLi, S., 2022, In: BMC Genomics. 23, Supplement 4, 827.

    Research output: Journal Publications and Reviews (RGC: 21, 22, 62)21_Publication in refereed journalpeer-review

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  6. 2021
  7. Published

    Transcriptome Atlas of 16 Donkey Tissues

    Wang, Y., Miao, X., Zhao, Z., Wang, Y., Li, S. & Wang, C., Aug 2021, In: Frontiers in Genetics. 12, 682734.

    Research output: Journal Publications and Reviews (RGC: 21, 22, 62)21_Publication in refereed journalpeer-review

    Scopus citations: 6
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  8. Published

    Author Correction: Donkey genomes provide new insights into domestication and selection for coat color

    Wang, C., Li, H., Guo, Y., Huang, J., Sun, Y., Min, J., Wang, J., & 43 othersFang, X., Zhao, Z., Wang, S., Zhang, Y., Liu, Q., Jiang, Q., Wang, X., Guo, Y., Yang, C., Wang, Y., Tian, F., Zhuang, G., Fan, Y., Gao, Q., Li, Y., Ju, Z., Li, J., Li, R., Hou, M., Yang, G., Liu, G., Liu, W., Guo, J., Pan, S., Fan, G., Zhang, W., Zhang, R., Yu, J., Zhang, X., Yin, Q., Ji, C., Jin, Y., Yue, G., Liu, M., Xu, J., Liu, S., Jordana, J., Noce, A., Amills, M., Wu, D. D., Li, S., Zhou, X. & Zhong, J., 2021, In: Nature Communications. 12, 725.

    Research output: Journal Publications and Reviews (RGC: 21, 22, 62)Erratum

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  9. 2020
  10. Published

    Donkey genomes provide new insights into domestication and selection for coat color

    Wang, C., Li, H., Guo, Y., Huang, J., Sun, Y., Min, J., Wang, J., & 43 othersFang, X., Zhao, Z., Wang, S., Zhang, Y., Liu, Q., Jiang, Q., Wang, X., Guo, Y., Yang, C., Wang, Y., Tian, F., Zhuang, G., Fan, Y., Gao, Q., Li, Y., Ju, Z., Li, J., Li, R., Hou, M., Yang, G., Liu, G., Liu, W., Guo, J., Pan, S., Fan, G., Zhang, W., Zhang, R., Yu, J., Zhang, X., Yin, Q., Ji, C., Jin, Y., Yue, G., Liu, M., Xu, J., Liu, S., Jordana, J., Noce, A., Amills, M., Wu, D. D., Li, S., Zhou, X. & Zhong, J., 2020, In: Nature Communications. 11, 6014.

    Research output: Journal Publications and Reviews (RGC: 21, 22, 62)21_Publication in refereed journalpeer-review

    Scopus citations: 29
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  11. Published

    LDscaff: LD-based scaffolding of de novo genome assemblies

    Zhao, Z., Zhou, Y., Wang, S., Zhang, X., Wang, C. & Li, S., 2020, In: BMC Bioinformatics. 21, Suppl 21, 570.

    Research output: Journal Publications and Reviews (RGC: 21, 22, 62)21_Publication in refereed journalpeer-review

    Scopus citations: 2
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  12. 2018
  13. Published

    NGS-based likelihood ratio for identifying contributors in two- and three-person DNA mixtures

    Chan Mun Wei, J., Zhao, Z., Li, S. C. & Ng, Y. K., Jun 2018, In: Computational Biology and Chemistry. 74, p. 428-433

    Research output: Journal Publications and Reviews (RGC: 21, 22, 62)21_Publication in refereed journalpeer-review

    Scopus citations: 1
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  14. Published

    IsoRef improves the reference-based transcriptome assembly accuracy for RNA-seq data

    Ao, X., Zhao, Z. & Li, S., Mar 2018, Proceedings - 10th International Conference on Bioinformatics and Computational Biology (BICOB 2018). Al-Mubaid, H., Ding, Q. & Eulenstein, O. (eds.). The International Society for Computers and Their Applications (ISCA), p. 148-153

    Research output: Chapters, Conference Papers, Creative and Literary Works (RGC: 12, 32, 41, 45)32_Refereed conference paper (with ISBN/ISSN)peer-review

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  15. 2017
  16. Published

    Search for More Effective Microsatellite Markers for Forensics with Next-Generation Sequencing

    Tan, B., Zhao, Z., Zhang, Z., Li, S. & Li, S. C., Jul 2017, In: IEEE Transactions on Nanobioscience. 16, 5, p. 375-381 7942045.

    Research output: Journal Publications and Reviews (RGC: 21, 22, 62)21_Publication in refereed journalpeer-review

    Scopus citations: 1
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  17. Accepted/In press/Filed

    Method for Next Generation Sequencing based Genetic Testing

    TAN, B., ZHAO, Z. & LI, S., 9 May 2017, (Accepted/In press/Filed) Priority No. 15/590,120

    Research output: Patents, Agreements and Assignments (RGC: 51, 52, 53)51_Patents granted (CityU only, data source from KTO)

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  18. Published

    Eliminating heterozygosity from reads through coverage normalization

    Zhao, Z., Ng, Y. K., Fang, X. & Li, S., 17 Jan 2017, Proceedings - 2016 IEEE International Conference on Bioinformatics and Biomedicine, BIBM 2016. Tian, T., Jiang, Q., Liu, Y., Burrage, K., Song, J., Wang, Y., Hu, Morishita, S., Zhu, Q. & Wang, G. (eds.). Institute of Electrical and Electronics Engineers Inc., p. 174-177 7822514. (IEEE International Conference on Bioinformatics and Biomedicine-BIBM).

    Research output: Chapters, Conference Papers, Creative and Literary Works (RGC: 12, 32, 41, 45)32_Refereed conference paper (with ISBN/ISSN)peer-review

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  19. 2016
  20. Published

    Finding more effective microsatellite markers for forensics

    Tan, B., Zhang, Z., Zhao, Z., Li, S. & Li, S. C., Dec 2016, Proceedings : 2016 IEEE International Conference on Bioinformatics and Biomedicine. Tian, T., Jiang, Q., Liu, Y., Burrage, K., Song, J., Wang, Y., Hu, X., Morishita, S., Zhu, Q. & Wang, G. (eds.). Institute of Electrical and Electronics Engineers Inc., p. 658-663

    Research output: Chapters, Conference Papers, Creative and Literary Works (RGC: 12, 32, 41, 45)32_Refereed conference paper (with ISBN/ISSN)peer-review

    Scopus citations: 1
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  21. Published

    Development of a SNP array and its application to genetic mapping and diversity assessment in pepper (Capsicum spp.)

    Cheng, J., Qin, C., Tang, X., Zhou, H., Hu, Y., Zhao, Z., Cui, J., & 4 othersLi, B., Wu, Z., Yu, J. & Hu, K., 13 Sep 2016, In: Scientific Reports. 6, 33293.

    Research output: Journal Publications and Reviews (RGC: 21, 22, 62)21_Publication in refereed journalpeer-review

    Scopus citations: 26
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  22. Published

    A comprehensive characterization of simple sequence repeats in pepper genomes provides valuable resources for marker development in Capsicum

    Cheng, J., Zhao, Z., Li, B., Qin, C., Wu, Z., Trejo-Saavedra, D. L., Luo, X., & 4 othersCui, J., Rivera-Bustamante, R. F., Li, S. & Hu, K., 7 Jan 2016, In: Scientific Reports. 6, 18919.

    Research output: Journal Publications and Reviews (RGC: 21, 22, 62)21_Publication in refereed journalpeer-review

    Scopus citations: 53
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