Mr. JI Yongxin (紀勇昕)

Research Output

  1. 2023
  2. Published

    PLASMe: a tool to identify PLASMid contigs from short-read assemblies using transformer

    Tang, X., Shang, J., Ji, Y. & Sun, Y., 25 Aug 2023, In: Nucleic Acids Research. 51, 15, e83.

    Research output: Journal Publications and ReviewsRGC 21 - Publication in refereed journalpeer-review

    Scopus citations: 10
    Check@CityULib
  3. Published

    HOTSPOT: hierarchical host prediction for assembled plasmid contigs with transformer

    Ji, Y., Shang, J., Tang, X. & Sun, Y., May 2023, In: Bioinformatics. 39, 5, btad283.

    Research output: Journal Publications and ReviewsRGC 21 - Publication in refereed journalpeer-review

    Scopus citations: 4
    Check@CityULib
  4. Published

    High-resolution strain-level microbiome composition analysis from short reads

    Liao, H., Ji, Y. & Sun, Y., 2023, In: Microbiome. 11, 183.

    Research output: Journal Publications and ReviewsRGC 21 - Publication in refereed journalpeer-review

    Scopus citations: 7
    Check@CityULib