TANG Xubo (湯旭博)
Research Output
- 2023
- Accepted/In press/Filed
PhaVIP: Phage VIrion Protein classification based on chaos game representation and Vision Transformer
Shang, J., Peng, C., Tang, X. & Sun, Y., Jul 2023, (Accepted/In press/Filed) ISMB/ECCB 2023 Proceedings.Research output: Chapters, Conference Papers, Creative and Literary Works (RGC: 12, 32, 41, 45) › 32_Refereed conference paper (with ISBN/ISSN) › peer-review
- Published
HOTSPOT: hierarchical host prediction for assembled plasmid contigs with transformer
Ji, Y., Shang, J., Tang, X. & Sun, Y., May 2023, In: Bioinformatics. 39, 5, btad283.Research output: Journal Publications and Reviews (RGC: 21, 22, 62) › 21_Publication in refereed journal › peer-review
- Published
VirBot: an RNA viral contig detector for metagenomic data
Chen, G., Tang, X., Shi, M. & Sun, Y., Mar 2023, In: Bioinformatics. 39, 3, btad093.Research output: Journal Publications and Reviews (RGC: 21, 22, 62) › 21_Publication in refereed journal › peer-review
- Published
Critical Assessment of Whole Genome and Viral Enrichment Shotgun Metagenome on the Characterization of Stool Total Virome in Hepatocellular Carcinoma Patients
Zhang, F., Gia, A., Chen, G., Gong, L., Behary, J., Hold, G. L., Zekry, A., & 4 others, Jan 2023, In: Viruses. 15, 1, 13 p.Research output: Journal Publications and Reviews (RGC: 21, 22, 62) › 21_Publication in refereed journal › peer-review
- Published
PhaTYP: predicting the lifestyle for bacteriophages using BERT
Shang, J., Tang, X. & Sun, Y., Jan 2023, In: Briefings in Bioinformatics. 24, 1, bbac487.Research output: Journal Publications and Reviews (RGC: 21, 22, 62) › 21_Publication in refereed journal › peer-review
Scopus citations: 2 - 2022
- Published
Accurate identification of bacteriophages from metagenomic data using Transformer
Shang, J., Tang, X., Guo, R. & Sun, Y., Jul 2022, In: Briefings in Bioinformatics. 23, 4, bbac258.Research output: Journal Publications and Reviews (RGC: 21, 22, 62) › 21_Publication in refereed journal › peer-review
Scopus citations: 3 - Published
RdRp-based sensitive taxonomic classification of RNA viruses for metagenomic data
Tang, X., Shang, J. & Sun, Y., Mar 2022, In: Briefings in Bioinformatics. 23, 2, bbac011.Research output: Journal Publications and Reviews (RGC: 21, 22, 62) › 21_Publication in refereed journal › peer-review
Scopus citations: 1 - 2019
- Published
Fast and accurate microRNA search using CNN
Tang, X. & Sun, Y., 2019, In: BMC Bioinformatics. 20, 646.Research output: Journal Publications and Reviews (RGC: 21, 22, 62) › 21_Publication in refereed journal › peer-review
Scopus citations: 7
