Prof. DENG Xin (鄧新)

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Research Output

  1. 2024
  2. Published

    Structure-Based Discovery of Symmetric Disulfides from Garlic Extract as Pseudomonas aeruginosa Quorum Sensing Inhibitors

    Zhang, Z.-S., He, Z., Shi, Y., Guan, M., Zhao, D.-S., Zhu, D. & Xiong, L.-T. & 3 others, Li, Y., Deng, X. & Cui, Z.-N., 18 Sept 2024, In: Journal of Agricultural and Food Chemistry. 72, 37, p. 20299-20307

    Research output: Journal Publications and Reviews › RGC 21 - Publication in refereed journal › peer-review

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  3. Published

    Analysis of bacterial transcriptome and epitranscriptome using nanopore direct RNA sequencing

    Tan, L., Guo, Z., Shao, Y., Ye, L., Wang, M., Deng, X. & Chen, S. & 1 others, LI, R., 27 Aug 2024, In: Nucleic acids research. 52, 15, p. 8746-8762 17 p.

    Research output: Journal Publications and Reviews › RGC 21 - Publication in refereed journal › peer-review

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  4. Published

    Hfq mediates transcriptome-wide RNA structurome reprogramming under virulence-inducing conditions in a phytopathogen

    Hua, C., Huang, J., Sun, Y., Wang, T., Li, Y., Cui, Z. & Deng, X., 27 Aug 2024, In: Cell Reports. 43, 8, 114544.

    Research output: Journal Publications and Reviews › RGC 21 - Publication in refereed journal › peer-review

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  5. Published

    Design and Synthesis of Aryl Amide Derivatives Containing Thiazole as Type III Secretion System Inhibitors against Pseudomonas aeruginosa

    Guan, M., Zhu, D., Wei, J., He, Z., Xiong, L.-T., Zeng, Y. & Song, G. & 2 others, Deng, X. & Cui, Z.-N., 7 Aug 2024, In: Journal of Agricultural and Food Chemistry. 72, 31, p. 17210-17218

    Research output: Journal Publications and Reviews › RGC 21 - Publication in refereed journal › peer-review

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  6. Online published

    DNA Methylome Regulates Virulence and Metabolism in Pseudomonas syringae

    Huang, J., Chen, F., Lu, B., Sun, Y., Li, Y., Hua, C. & Deng, X., 12 Apr 2024, (Online published) (eLife).

    Research output: Working Papers › Reviewed Preprint › peer-review

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  7. Published

    N6-methyladenosine facilitates mitochondrial fusion of colorectal cancer cells via induction of GSH synthesis and stabilization of OPA1 mRNA

    Zhou, J., Zhang, H., Zhong, K., Tao, L., Lin, Y., Xie, G. & Tan, Y. & 8 others, Wu, Y., Lu, Y., Chen, Z., Li, J., Deng, X., Peng, Q., Li, Z. & Wang, H., Mar 2024, In: National Science Review. 11, 3, nwae039.

    Research output: Journal Publications and Reviews › RGC 21 - Publication in refereed journal › peer-review

    Scopus citations: 2
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  8. Published

    Microenvironment responsive charge-switchable nanoparticles act on biofilm eradication and virulence inhibition for chronic lung infection treatment

    Li, P., Pan, J., Dong, Y., Sun, Y., Wang, Y., Liao, K. & Chen, Y. & 3 others, Deng, X., Yu, S. & Hu, H., Jan 2024, In: Journal of Controlled Release. 365, p. 219-235

    Research output: Journal Publications and Reviews › RGC 21 - Publication in refereed journal › peer-review

    Scopus citations: 5
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  9. Published

    Architecture of genome-wide transcriptional regulatory network reveals dynamic functions and evolutionary trajectories in Pseudomonas syringae

    Sun, Y., Li, J., Huang, J., Li, S., Li, Y., Lu, B. & Deng, X., 2024, eLife Sciences Publications, Ltd, (eLife).

    Research output: Working Papers › Reviewed Preprint › peer-review

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  10. Published

    The single-cell transcriptomic atlas and RORA-mediated 3D epigenomic remodeling in driving corneal epithelial differentiation

    Li, M., Guo, H., Wang, B., Han, Z., Wu, S., Liu, J. & Huang, H. & 11 others, Zhu, J., An, F., Lin, Z., Mo, K., Tan, J., Liu, C., Wang, L., Deng, X., Li, G., Ji, J. & Ouyang, H., 2024, In: Nature Communications. 15, 256.

    Research output: Journal Publications and Reviews › RGC 21 - Publication in refereed journal › peer-review

    Scopus citations: 2
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  11. 2023
  12. Published

    Derivative of cinnamic acid inhibits T3SS of Xanthomonas oryzae pv. oryzae through the HrpG-HrpX regulatory cascade

    Shi, Y., Xiong, L.-T., Li, H., Li, W.-L., O'Neill Rothenberg, D., Liao, L.-S. & Deng, X. & 2 others, Song, G.-P. & Cui, Z.-N., Dec 2023, In: Bioorganic Chemistry. 141, 106871.

    Research output: Journal Publications and Reviews › RGC 21 - Publication in refereed journal › peer-review

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  13. Published

    Novel mandelic acid derivatives suppress virulence of Ralstonia solanacearum via type III secretion system

    Guo, Q.-Q., Li, Y.-Z., Shi, H.-B., Yi, A.-Y., Xu, X.-L., Wang, H.-H. & Deng, X. & 2 others, Wu, Z.-B. & Cui, Z.-N., Nov 2023, In: Pest Management Science. 79, 11, p. 4626-4634

    Research output: Journal Publications and Reviews › RGC 21 - Publication in refereed journal › peer-review

    Scopus citations: 2
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  14. Published

    c-di-GMP signaling in Pseudomonas syringae complex

    Wang, T., Hua, C. & Deng, X., Oct 2023, In: Microbiological Research. 275, 127445.

    Research output: Journal Publications and Reviews › RGC 21 - Publication in refereed journal › peer-review

    Scopus citations: 2
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  15. Published

    The transcriptional regulators of virulence for Pseudomonas aeruginosa: Therapeutic opportunity and preventive potential of its clinical infections

    Shao, X., Yao, C., Ding, Y., Hu, H., Qian, G., He, M. & Deng, X., Sept 2023, In: Genes and Diseases. 10, 5, p. 2049-2063

    Research output: Journal Publications and Reviews › RGC 21 - Publication in refereed journal › peer-review

    Scopus citations: 9
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  16. Published

    A novel strategy to control Pseudomonas syringae through inhibition of type III secretion system

    He, L.-L., Wang, X., Rothenberg, D. O., Xu, X., Wang, H.-H., Deng, X. & Cui, Z.-N., Aug 2023, In: Pesticide Biochemistry and Physiology. 194, 105471.

    Research output: Journal Publications and Reviews › RGC 21 - Publication in refereed journal › peer-review

    Scopus citations: 3
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  17. Published

    Novel Ethyl-3-Aryl-2-Nitroacrylate Derivatives as Potential T3SS Inhibitors against Xanthomonas oryzae pv. oryzae on Rice

    Gao, D., Li, H., Shao, J., He, L., Fu, C., Lai, H. & Rothenberg, D. O. & 4 others, Xu, X., Song, G., Deng, X. & Cui, Z.-N., 21 Jun 2023, In: Journal of Agricultural and Food Chemistry. 71, 24, p. 9291-9301

    Research output: Journal Publications and Reviews › RGC 21 - Publication in refereed journal › peer-review

    Scopus citations: 3
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  18. Published

    Protocol for integrated analysis of bacterial RNA-seq and ChIP-seq data for establishing a co-expression network

    Ding, Y., Li, J., Li, T. & Deng, X., 16 Jun 2023, In: STAR Protocols. 4, 2, 102322.

    Research output: Journal Publications and Reviews › RGC 21 - Publication in refereed journal › peer-review

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  19. Published

    Osteoclast-targeted delivery of anti-miRNA oligonucleotides by red blood cell extracellular vesicles

    Xu, L., Xu, X., Liang, Y., Wen, C., Ouyang, K., Huang, J. & Xiao, Y. & 3 others, Deng, X., Xia, J. & Duan, L., Jun 2023, In: Journal of Controlled Release. 358, p. 259-272 14 p.

    Research output: Journal Publications and Reviews › RGC 21 - Publication in refereed journal › peer-review

    Scopus citations: 33
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  20. Online published

    Novel pyrimidin-4-one derivatives as potential T3SS inhibitors against Xanthomonas campestris pv. campestris

    Li, J.-B., Xiong, L.-T., Lu, Y.-R., Zhang, Y.-Q., Xu, X.-L., Wang, H.-H. & Deng, X. & 2 others, Hu, X.-H. & Cui, Z.-N., 11 May 2023, (Online published) In: Pest Management Science.

    Research output: Journal Publications and Reviews › RGC 21 - Publication in refereed journal › peer-review

    Scopus citations: 1
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  21. Published

    Heavy-metal resistant bio-hybrid with biogenic ferrous sulfide nanoparticles: pH-regulated self-assembly and wastewater treatment application

    Fu, X.-Z., Wu, J., Li, J., Ding, J., Cui, S., Wang, X.-M. & Wang, Y.-J. & 4 others, Liu, H.-Q., Deng, X., Liu, D.-F. & Li, W.-W., 15 Mar 2023, In: Journal of Hazardous Materials. 446, 130667.

    Research output: Journal Publications and Reviews › RGC 21 - Publication in refereed journal › peer-review

    Scopus citations: 8
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  22. Published

    Type III Secretion System Repressor RhpR Induces GrlP, a Glycine-Rich Outer Membrane Lipoprotein with Functions in Regulating the Periplasmic Space and Pleiotropic Responses

    Li, K., Liao, C., Wang, T., Song, L., Deng, X., Yan, W. & Fang, R. & 2 others, Jia, Y. & Tang, X., 31 Jan 2023, In: Applied and Environmental Microbiology. 89, 1, e01587-22.

    Research output: Journal Publications and Reviews › RGC 21 - Publication in refereed journal › peer-review

    Scopus citations: 2
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