Prof. ZHU Xiaowei (朱曉維)

Research Output

  1. 2024
  2. Published

    High-Frequency Spinal Stimulation Suppresses Microglial Kaiso-P2X7 Receptor Axis-Induced Inflammation to Alleviate Neuropathic Pain in Rats

    Yu, J., Wong, S., Lin, Z., Shan, Z., Fan, C., Xia, Z., Cheung, M., & 3 othersZhu, X., Liu, J. A. & Cheung, C. W., May 2024, In: Annals of Neurology. 95, 5, p. 966-983

    Research output: Journal Publications and ReviewsRGC 21 - Publication in refereed journalpeer-review

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  3. 2023
  4. Published

    LncRNA-Top: Controlled Deep Learning Approaches for LncRNA Gene Regulatory Relationship Annotations across Different Platforms

    Xie, W., Chen, X., Zheng, Z., Wang, F., Zhu, X., Lin, Q., Sun, Y., & 1 othersWong, K., 17 Nov 2023, In: iScience. 26, 11, 108197.

    Research output: Journal Publications and ReviewsRGC 21 - Publication in refereed journalpeer-review

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  5. Author Correction: The landscape of somatic mutation in cerebral cortex of autistic and neurotypical individuals revealed by ultra-deep whole-genome sequencing

    Rodin, R. E., Dou, Y., Kwon, M., Sherman, M. A., D’Gama, A. M., Doan, R. N., Rento, L. M., & 10 othersGirskis, K. M., Bohrson, C. L., Kim, S. N., Nadig, A., Luquette, L. J., Gulhan, D. C., Walsh, C. A., Park, P. J., Brain Somatic Mosaicism Network, including, B. S. M. N. I. & Zhu, X., Oct 2023, In: Nature Neuroscience. 26, 10, p. 1833

    Research output: Journal Publications and ReviewsErratum

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  6. Author Correction: Machine learning reveals bilateral distribution of somatic L1 insertions in human neurons and glia

    Zhu, X., Zhou, B., Pattni, R., Gleason, K., Tan, C., Kalinowski, A., Sloan, S., & 13 othersFiston-Lavier, A., Mariani, J., Petrov, D., Barres, B. A., Duncan, L., Abyzov, A., Vogel, H., Brain Somatic Mosaicism Network, B. S. M. N., Moran, J. V., Vaccarino, F. M., Tamminga, C. A., Levinson, D. F. & Urban, A. E., Oct 2023, In: Nature Neuroscience. 26, 10, p. 1833

    Research output: Journal Publications and ReviewsErratum

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  7. Control-independent mosaic single nucleotide variant detection with DeepMosaic

    Yang, X., Xu, X., Breuss, M. W., Antaki, D., Ball, L. L., Chung, C., Shen, J., & 12 othersLi, C., George, R. D., Wang, Y., Bae, T., Cheng, Y., Abyzov, A., Wei, L., Alexandrov, L. B., Sebat, J. L., NIMH Brain Somatic Mosaicism Network, 102 authors, including, N. B. S. M. N. 1. A. I., Zhu, X. & Gleeson, J. G., Jun 2023, In: Nature Biotechnology. 41, 6, p. 870-877

    Research output: Journal Publications and ReviewsRGC 21 - Publication in refereed journalpeer-review

    Scopus citations: 10
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  8. Comprehensive multi-omic profiling of somatic mutations in malformations of cortical development

    202 authors, including, 2. A. I., Chung, C., Focal Cortical Dysplasia Neurogenetics Consortium, including, F. C. D. N. C. I., Brain Somatic Mosaicism Network, including, B. S. M. N. I., Zhu, X. & Gleeson, J. G., Feb 2023, In: Nature Genetics. 55, 2, p. 209-220

    Research output: Journal Publications and ReviewsRGC 21 - Publication in refereed journalpeer-review

    Scopus citations: 27
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  9. Published

    Exogenous L-lactate administration in rat hippocampus increases expression of key regulators of mitochondrial biogenesis and antioxidant defense

    Akter, M., Ma, H., Hasan, M., Karim, A., Zhu, X., Zhang, L. & Li, Y., 2023, In: Frontiers in Molecular Neuroscience. 16, 1117146.

    Research output: Journal Publications and ReviewsRGC 21 - Publication in refereed journalpeer-review

    Scopus citations: 7
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  10. Published

    Gene coexpression network during ontogeny in the yellow fever mosquito, Aedes aegypti

    Lin, Z., Huang, Y., Liu, S., Huang, Q., Zhang, B., Wang, T., Zhang, Z., & 3 othersZhu, X., Liao, C. & Han, Q., 2023, In: BMC Genomics. 24, 301.

    Research output: Journal Publications and ReviewsRGC 21 - Publication in refereed journalpeer-review

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  11. 2022
  12. Somatic mosaicism reveals clonal distributions of neocortical development

    Breuss, M. W., Yang, X., Schlachetzki, J. C. M., Antaki, D., Lana, A. J., Xu, X., Chung, C., & 20 othersChai, G., Stanley, V., Song, Q., Newmeyer, T. F., Nguyen, A., O’Brien, S., Hoeksema, M. A., Cao, B., Nott, A., McEvoy-Venneri, J., Pasillas, M. P., Barton, S. T., Copeland, B. R., Nahas, S., Van Der Kraan, L., Ding, Y., NIMH Brain Somatic Mosaicism Network, including, N. B. S. M. N. I., Zhu, X., Glass, C. K. & Gleeson, J. G., 28 Apr 2022, In: Nature. 604, 7907, p. 689-696

    Research output: Journal Publications and ReviewsRGC 21 - Publication in refereed journalpeer-review

    Scopus citations: 19
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  13. 2021
  14. PRG2 and AQPEP are misexpressed in fetal membranes in placenta previa and percreta

    Zhang, E. T., Hannibal, R. L., Badillo Rivera, K. M., Song, J. H., McGowan, K., Zhu, X., Meinhardt, G., & 6 othersKnöfler, M., Pollheimer, J., Urban, A. E., Folkins, A. K., Lyell, D. J. & Baker, J. C., Jul 2021, In: Biology of Reproduction. 105, 1, p. 244-257

    Research output: Journal Publications and ReviewsRGC 21 - Publication in refereed journalpeer-review

    Scopus citations: 4
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  15. Author Correction: The landscape of somatic mutation in cerebral cortex of autistic and neurotypical individuals revealed by ultra-deep whole-genome sequencing

    107 authors, including, 1. A. I., Rodin, R. E., Walsh, C. A., Park, P. J. & Zhu, X., Apr 2021, In: Nature Neuroscience. 24, 4, p. 611

    Research output: Journal Publications and ReviewsErratum

    Scopus citations: 5
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  16. Machine learning reveals bilateral distribution of somatic L1 insertions in human neurons and glia

    112 authors, including, 1. A. I., Zhu, X. & Urban, A. E., Feb 2021, In: Nature Neuroscience. 24, 2, p. 186-196

    Research output: Journal Publications and ReviewsRGC 21 - Publication in refereed journalpeer-review

    Scopus citations: 16
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  17. The landscape of somatic mutation in cerebral cortex of autistic and neurotypical individuals revealed by ultra-deep whole-genome sequencing

    107 authors, including, 1. A. I., Rodin, R. E., Walsh, C. A., Park, P. J. & Zhu, X., Feb 2021, In: Nature Neuroscience. 24, 2, p. 176-185

    Research output: Journal Publications and ReviewsRGC 21 - Publication in refereed journalpeer-review

    Scopus citations: 63
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  18. 2019
  19. Metabolism of cholesterol and progesterone is differentially regulated in primary trophoblastic subtypes and might be disturbed in recurrent miscarriages

    Vondra, S., Kunihs, V., Eberhart, T., Eigner, K., Bauer, R., Haslinger, P., Haider, S., & 12 othersWindsperger, K., Klambauer, G., Schütz, B., Mikula, M., Zhu, X., Urban, A. E., Hannibal, R. L., Baker, J., Knöfler, M., Stangl, H., Pollheimer, J. & Röhrl, C., Nov 2019, In: Journal of Lipid Research. 60, 11, p. 1922-1934

    Research output: Journal Publications and ReviewsRGC 21 - Publication in refereed journalpeer-review

    Scopus citations: 25
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  20. Haplotype-resolved and integrated genome analysis of the cancer cell line HepG2

    Zhou, B., Ho, S. S., Greer, S. U., Spies, N., Bell, J. M., Zhang, X., Zhu, X., & 11 othersArthur, J. G., Byeon, S., Pattni, R., Saha, I., Huang, Y., Song, G., Perrin, D., Wong, W. H., Ji, H. P., Abyzov, A. & Urban, A. E., 7 May 2019, In: Nucleic acids research. 47, 8, p. 3846-3861

    Research output: Journal Publications and ReviewsRGC 21 - Publication in refereed journalpeer-review

    Scopus citations: 34
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  21. Comprehensive, integrated, and phased whole-genome analysis of the primary ENCODE cell line K562

    Zhou, B., Ho, S. S., Greer, S. U., Zhu, X., Bell, J. M., Arthur, J. G., Spies, N., & 12 othersZhang, X., Byeon, S., Pattni, R., Ben-Efraim, N., Haney, M. S., Haraksingh, R. R., Song, G., Ji, H. P., Perrin, D., Wong, W. H., Abyzov, A. & Urban, A. E., 1 Mar 2019, In: Genome Research. 29, 3, p. 472-484

    Research output: Journal Publications and ReviewsRGC 21 - Publication in refereed journalpeer-review

    Scopus citations: 54
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  22. 2018
  23. Local and global chromatin interactions are altered by large genomic deletions associated with human brain development

    Zhang, X., Zhang, Y., Zhu, X., Purmann, C., Haney, M. S., Ward, T., Khechaduri, A., & 3 othersYao, J., Weissman, S. M. & Urban, A. E., 1 Dec 2018, In: Nature Communications. 9, 1, 5356.

    Research output: Journal Publications and ReviewsRGC 21 - Publication in refereed journalpeer-review

    Scopus citations: 32
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  24. Genome amplification and cellular senescence are hallmarks of human placenta development

    Velicky, P., Meinhardt, G., Plessl, K., Vondra, S., Weiss, T., Haslinger, P., Lendl, T., & 16 othersAumayr, K., Mairhofer, M., Zhu, X., Schütz, B., Hannibal, R. L., Lindau, R., Weil, B., Ernerudh, J., Neesen, J., Egger, G., Mikula, M., Röhrl, C., Urban, A. E., Baker, J., Knöfler, M. & Pollheimer, J., 1 Oct 2018, In: PLoS Genetics. 14, 10, e1007698.

    Research output: Journal Publications and ReviewsRGC 21 - Publication in refereed journalpeer-review

    Scopus citations: 62
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  25. Detection and quantification of mosaic genomic dna variation in primary somatic tissues using ddPCR: analysis of mosaic transposable-element insertions, copy-number variants, and single-nucleotide variants

    Zhou, B., Haney, M. S., Zhu, X., Pattni, R., Abyzov, A. & Urban, A. E., 2018, Methods in Molecular Biology. Humana Press Inc., Vol. 1768. p. 173-190 (Methods in Molecular Biology; vol. 1768).

    Research output: Chapters, Conference Papers, Creative and Literary WorksRGC 12 - Chapter in an edited book (Author)peer-review

    Scopus citations: 11
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  26. 2017
  27. Allele-specific expression reveals interactions between genetic variation and environment

    Knowles, D. A., Davis, J. R., Edgington, H., Raj, A., Favé, M., Zhu, X., Potash, J. B., & 7 othersWeissman, M. M., Shi, J., Levinson, D. F., Awadalla, P., Mostafavi, S., Montgomery, S. B. & Battle, A., 29 Jun 2017, In: Nature Methods. 14, 7, p. 699-702

    Research output: Journal Publications and ReviewsRGC 21 - Publication in refereed journalpeer-review

    Scopus citations: 86
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