FANG Xiaodong (方晓東)

Research Output

  1. 2019
  2. Published

    A draft genome assembly of the solar-powered sea slug Elysia chlorotica

    Cai, H., Li, Q., Fang, X., Li, J., Curtis, N. E., Altenburger, A., Shibata, T. & 11 others, Feng, M., Maeda, T., Schwartz, J. A., Shigenobu, S., Lundholm, N., Nishiyama, T., Yang, H., Hasebe, M., Li, S., Pierce, S. K. & Wang, J., 2019, In : Scientific data. 6, 190022.

    Research output: Journal Publications and Reviews (RGC: 21, 22, 62)21_Publication in refereed journal

    Scopus citations: 6
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  3. 2018
  4. Published

    Coding mutations in NUS1 contribute to Parkinson's disease

    Guo, J., Zhang, L., Li, K., Mei, J., Xue, J., Chen, J., Tang, X. & 33 others, Shen, L., Jiang, H., Chen, C., Guo, H., Wu, X., Sun, S., Xu, Q., Sun, Q., Chan, P., Shang, H., Wang, T., Zhao, G., Liu, J., Xie, X., Jiang, Y., Liu, Z., Zhao, Y., Zhu, Z., Li, J., Hu, Z., Yan, X., Fang, X., Wang, G., Zhang, F., Xia, K., Liu, C., Zhu, X., Yue, Z., Li, S. C., Cai, H., Zhang, Z., Duan, R. & Tang, B., 6 Nov 2018, In : Proceedings of the National Academy of Sciences of the United States of America. 115, 45, p. 11567-11572

    Research output: Journal Publications and Reviews (RGC: 21, 22, 62)21_Publication in refereed journal

    Scopus citations: 20
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  5. Online published

    Population genomics of finless porpoises reveal an incipient cetacean species adapted to freshwater

    Zhou, X., Guang, X., Sun, D., Xu, S., Li, M., Seim, I., Jie, W. & 14 others, Yang, L., Zhu, Q., Xu, J., Gao, Q., Kaya, A., Dou, Q., Chen, B., Ren, W., Li, S., Zhou, K., Gladyshev, V. N., Nielsen, R., Fang, X. & Yang, G., 10 Apr 2018, In : Nature Communications. 9, 1276.

    Research output: Journal Publications and Reviews (RGC: 21, 22, 62)21_Publication in refereed journal

    Scopus citations: 19
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  6. 2017
  7. Published

    Genome of the pitcher plant Cephalotus reveals genetic changes associated with carnivory

    Fukushima, K., Fang, X., Alvarez-Ponce, D., Cai, H., Carretero-Paulet, L., Chen, C., Chang, T. & 26 others, Farr, K. M., Fujita, T., Hiwatashi, Y., Hoshi, Y., Imai, T., Kasahara, M., Librado, P., Mao, L., Mori, H., Nishiyama, T., Nozawa, M., Pálfalvi, G., Pollard, S. T., Rozas, J., Sánchez-Gracia, A., Sankoff, D., Shibata, T. F., Shigenobu, S., Sumikawa, N., Uzawa, T., Xie, M., Zheng, C., Pollock, D. D., Albert, V. A., Li, S. & Hasebe, M., 6 Feb 2017, In : Nature Ecology and Evolution. 1, 3, 0059.

    Research output: Journal Publications and Reviews (RGC: 21, 22, 62)21_Publication in refereed journal

    Scopus citations: 36
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  8. Published

    Eliminating heterozygosity from reads through coverage normalization

    Zhao, Z., Ng, Y. K., Fang, X. & Li, S., 17 Jan 2017, Proceedings - 2016 IEEE International Conference on Bioinformatics and Biomedicine, BIBM 2016. Tian, T., Jiang, Q., Liu, Y., Burrage, K., Song, J., Wang, Y., Hu, Morishita, S., Zhu, Q. & Wang, G. (eds.). Institute of Electrical and Electronics Engineers Inc., p. 174-177 7822514. (IEEE International Conference on Bioinformatics and Biomedicine-BIBM).

    Research output: Chapters, Conference Papers, Creative and Literary Works (RGC: 12, 32, 41, 45)32_Refereed conference paper (with ISBN/ISSN)

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  9. 2015
  10. Published

    Outbred genome sequencing and CRISPR/Cas9 gene editing in butterflies

    Li, X., Fan, D., Zhang, W., Liu, G., Zhang, L., Zhao, L., Fang, X. & 17 others, Chen, L., Dong, Y., Chen, Y., Ding, Y., Zhao, R., Feng, M., Zhu, Y., Feng, Y., Jiang, X., Zhu, D., Xiang, H., Feng, X., Li, S., Wang, J., Zhang, G., Kronforst, M. R. & Wang, W., 10 Sep 2015, In : Nature Communications. 6, 8212.

    Research output: Journal Publications and Reviews (RGC: 21, 22, 62)21_Publication in refereed journal

    Scopus citations: 88
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  11. Published

    Erratum: Genome-wide adaptive complexes to underground stresses in blind mole rats Spalax (Nature Communications (2015) 5 (3966) DOI: 10.1038/ncomms4966)

    Fang, X., Nevo, E., Han, L., Levanon, E. Y., Zhao, J., Avivi, A., Larkin, D. & 46 others, Jiang, X., Feranchuk, S., Zhu, Y., Fishman, A., Feng, Y., Sher, N., Xiong, Z., Hankeln, T., Huang, Z., Gorbunova, V., Zhang, L., Zhao, W., Wildman, D. E., Xiong, Y., Gudkov, A., Zheng, Q., Rechavi, G., Liu, S., Bazak, L., Chen, J., Knisbacher, B. A., Lu, Y., Shams, I., Gajda, K., Farré, M., Kim, J., Lewin, H. A., Ma, J., Band, M., Bicker, A., Kranz, A., Mattheus, T., Schmidt, H., Seluanov, A., Azpurua, J., McGowen, M. R., Ben Jacob, E., Li, K., Peng, S., Zhu, X., Liao, X., Li, S., Krogh, A., Zhou, X., Brodsky, L. & Wang, J., 12 Aug 2015, In : Nature Communications. 6, 8051.

    Research output: Journal Publications and Reviews (RGC: 21, 22, 62)Comment/debate

    Scopus citations: 1
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  12. Published

    Genome-wide profiling of HPV integration in cervical cancer identifies clustered genomic hot spots and a potential microhomology-mediated integration mechanism

    Hu, Z., Zhu, D., Wang, W., Li, W., Jia, W., Zeng, X., Ding, W. & 29 others, Yu, L., Wang, X., Wang, L., Shen, H., Zhang, C., Liu, H., Liu, X., Zhao, Y., Fang, X., Li, S., Chen, W., Tang, T., Fu, A., Wang, Z., Chen, G., Gao, Q., Li, S., Xi, L., Wang, C., Liao, S., Ma, X., Wu, P., Li, K., Wang, S., Zhou, J., Wang, J., Xu, X., Wang, H. & Ma, D., 2015, In : Nature Genetics. 47, 2, p. 158-163

    Research output: Journal Publications and Reviews (RGC: 21, 22, 62)21_Publication in refereed journal

    Scopus citations: 161
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  13. 2014
  14. Published

    Whole-genome sequencing of cultivated and wild peppers provides insights into Capsicum domestication and specialization

    Qin, C., Yu, C., Shen, Y., Fang, X., Chen, L., Min, J., Cheng, J. & 66 others, Zhao, S., Xu, M., Luo, Y., Yang, Y., Wu, Z., Mao, L., Wu, H., Changying, L., Zhou, H., Lin, H., González-Morales, S., Trejo-Saavedra, D. L., Tian, H., Tang, X., Zhao, M., Huang, Z., Zhou, A., Yao, X., Cui, J., Li, W., Chen, Z., Feng, Y., Niu, Y., Bi, S., Yang, X., Li, W., Cai, H., Luo, X., Montes-Hernández, S., Leyva-González, M. A., Xiong, Z., He, X., Bai, L., Tan, S., Tang, X., Liu, D., Liu, J., Zhang, S., Chen, M., Zhang, L., Zhang, L., Zhang, Y., Liao, W., Zhang, Y., Wang, M., Lv, X., Wen, B., Liu, H., Luan, H., Zhang, Y., Yang, S., Wang, X., Xu, J., Li, X., Li, S., Wang, J., Palloix, A., Bosland, P. W., Li, Y., Krogh, A., Rivera-Bustamante, R. F., Herrera-Estrella, L., Yin, Y., Yu, J., Hu, K. & Zhang, Z., 8 Apr 2014, In : Proceedings of the National Academy of Sciences of the United States of America. 111, 14, p. 5135-5140

    Research output: Journal Publications and Reviews (RGC: 21, 22, 62)21_Publication in refereed journal

    Scopus citations: 294
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  15. Published

    Genome-wide adaptive complexes to underground stresses in blind mole rats Spalax

    Fang, X., Nevo, E., Han, L., Levanon, E. Y., Zhao, J., Avivi, A., Larkin, D. & 46 others, Jiang, X., Feranchuk, S., Zhu, Y., Fishman, A., Feng, Y., Sher, N., Xiong, Z., Hankeln, T., Huang, Z., Gorbunova, V., Zhang, L., Zhao, W., Wildman, D. E., Xiong, Y., Gudkov, A., Zheng, Q., Rechavi, G., Liu, S., Bazak, L., Chen, J., Knisbacher, B. A., Lu, Y., Shams, I., Gajda, K., Farré, M., Kim, J., Lewin, H. A., Ma, J., Band, M., Bicker, A., Kranz, A., Mattheus, T., Schmidt, H., Seluanov, A., Azpurua, J., McGowen, M. R., Ben Jacob, E., Li, K., Peng, S., Zhu, X., Liao, X., Li, S., Krogh, A., Zhou, X., Brodsky, L. & Wang, J., 2014, In : Nature Communications. 5, 3966.

    Research output: Journal Publications and Reviews (RGC: 21, 22, 62)21_Publication in refereed journal

    Scopus citations: 74
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  16. 2008
  17. The diploid genome sequence of an Asian individual

    Wang, J., Wang, W., Li, R., Li, Y., Tian, G., Goodman, L., Fan, W. & 70 others, Zhang, J., Li, J., Zhang, J., Guo, Y., Feng, B., Li, H., Lu, Y., Fang, X., Liang, H., Du, Z., Li, D., Zhao, Y., Hu, Y., Yang, Z., Zheng, H., Hellmann, I., Inouye, M., Pool, J., Yi, X., Zhao, J., Duan, J., Zhou, Y., Qin, J., Ma, L., Li, G., Yang, Z., Zhang, G., Yang, B., Yu, C., Liang, F., Li, W., Li, S., Li, D., Ni, P., Ruan, J., Li, Q., Zhu, H., Liu, D., Lu, Z., Li, N., Guo, G., Zhang, J., Ye, J., Fang, L., Hao, Q., Chen, Q., Liang, Y., Su, Y., San, A., Ping, C., Yang, S., Chen, F., Li, L., Zhou, K., Zheng, H., Ren, Y., Yang, L., Gao, Y., Yang, G., Li, Z., Feng, X., Kristiansen, K., Wong, G. K., Nielsen, R., Durbin, R., Bolund, L., Zhang, X., Li, S., Yang, H. & Wang, J., 6 Nov 2008, In : Nature. 456, 7218, p. 60-65

    Research output: Journal Publications and Reviews (RGC: 21, 22, 62)21_Publication in refereed journal

    Scopus citations: 698
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