Prof. LI Shuaicheng (李帥成)
Research Output
- 2016
Whole-Genome Sequencing Reveals Diverse Models of Structural Variations in Esophageal Squamous Cell Carcinoma
Cheng, C., Zhou, Y., Li, H., Xiong, T., Li, S., Bi, Y. & Kong, P. & 48 others, , 4 Feb 2016, In: American Journal of Human Genetics. 98, 2, p. 256-274Research output: Journal Publications and Reviews › RGC 21 - Publication in refereed journal › peer-review
Scopus citations: 111- 2015
Summary of the DREAM8 Parameter Estimation Challenge: Toward Parameter Identification for Whole-Cell Models
Karr, J. R., Williams, A. H., Zucker, J. D., Raue, A., Steiert, B., Timmer, J. & Kreutz, C. & 47 others, , 1 May 2015, In: PLoS Computational Biology. 11, 5, e1004096.Research output: Journal Publications and Reviews › RGC 21 - Publication in refereed journal › peer-review
Scopus citations: 29- 2012
Residues with similar hexagon neighborhoods share similar side-chain conformations
Li, S. C., Bu, D. & Li, M., 2012, In: IEEE/ACM Transactions on Computational Biology and Bioinformatics. 9, 1, p. 240-248 5753883.Research output: Journal Publications and Reviews › RGC 21 - Publication in refereed journal › peer-review
Scopus citations: 2- 2011
Pedigree Reconstruction Using Identity by Descent
KIRKPATRICK, B., LI, S. C., KARP, R. M. & HALPERIN, E., Nov 2011, In: Journal of Computational Biology. 18, 11, p. 1481-1493Research output: Journal Publications and Reviews › RGC 21 - Publication in refereed journal › peer-review
Scopus citations: 23On protein structure alignment under distance constraint
Li, S. C. & Ng, Y. K., 22 Jul 2011, In: Theoretical Computer Science. 412, 32, p. 4187-4199Research output: Journal Publications and Reviews › RGC 21 - Publication in refereed journal › peer-review
Scopus citations: 6Finding nearly optimal GDT scores
Li, S. C., Bu, D., Xu, J. & Li, M., 1 May 2011, In: Journal of Computational Biology. 18, 5, p. 693-704Research output: Journal Publications and Reviews › RGC 21 - Publication in refereed journal › peer-review
Scopus citations: 8Incorporating Ab Initio energy into threading approaches for protein structure prediction
Shao, M., Wang, S., Wang, C., Yuan, X., Li, S. C., Zheng, W. & Bu, D., 15 Feb 2011, In: BMC Bioinformatics. 12, SUPPL. 1, S54.Research output: Journal Publications and Reviews › RGC 21 - Publication in refereed journal › peer-review
Scopus citations: 5Error tolerant nmr backbone resonance assignment and automated structure generation
Alipanahi, B., Gao, X., Karakoc, E., Li, S. C., Balbach, F., Feng, G. & Donaldson, L. & 1 others, , Feb 2011, In: Journal of Bioinformatics and Computational Biology. 9, 1, p. 15-41Research output: Journal Publications and Reviews › RGC 21 - Publication in refereed journal › peer-review
Scopus citations: 22Pedigree Reconstruction Using Identity by Descent
Kirkpatrick, B., Li, S. C., Karp, R. M. & Halperin, E., 2011, Research in Computational Molecular Biology: 15th Annual International Conference, RECOMB 2011, Proceedings. Bafna, V. & Sahinalp, S. C. (eds.). Springer Verlag, p. 136-152 (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. LNBI 6577).Research output: Chapters, Conference Papers, Creative and Literary Works › RGC 32 - Refereed conference paper (with host publication) › peer-review
Scopus citations: 8- 2010
Protein secondary structure prediction using NMR chemical shift data
Zhao, Y., Alipanahi, B., Li, S. C. & Li, M., Oct 2010, In: Journal of Bioinformatics and Computational Biology. 8, 5, p. 867-884Research output: Journal Publications and Reviews › RGC 21 - Publication in refereed journal › peer-review
Scopus citations: 18Calibur: A tool for clustering large numbers of protein decoys
Li, S. C. & Ng, Y. K., 13 Jan 2010, In: BMC Bioinformatics. 11, 25.Research output: Journal Publications and Reviews › RGC 21 - Publication in refereed journal › peer-review
Scopus citations: 61- 2009
On Protein Structure Alignment under Distance Constraint
Li, S. C. & Ng, Y. K., Dec 2009, Algorithms and Computation: 20th International Symposium, ISAAC 2009, Proceedings. Dong, Y., Du, D.-Z. & Ibarra, O. (eds.). Springer Verlag, Vol. 5878 LNCS. p. 65-76 (Lecture Notes in Computer Science; vol. 5878).Research output: Chapters, Conference Papers, Creative and Literary Works › RGC 32 - Refereed conference paper (with host publication) › peer-review
Scopus citations: 10Finding compact structural motifs
Bu, D., Li, M., Li, S. C., Qian, J. & Xu, J., 20 Aug 2009, In: Theoretical Computer Science. 410, 30-32, p. 2834-2839Research output: Journal Publications and Reviews › RGC 21 - Publication in refereed journal › peer-review
Scopus citations: 2On two open problems of 2-interval patterns
Li, S. C. & Li, M., 28 May 2009, In: Theoretical Computer Science. 410, 24-25, p. 2410-2423Research output: Journal Publications and Reviews › RGC 21 - Publication in refereed journal › peer-review
Scopus citations: 6Predicting local quality of a sequence-structure alignment
Gao, X., Xu, J., Li, S. C. & Li, M., 2009, In: Journal of Bioinformatics and Computational Biology. 7, 5, p. 789-810Research output: Journal Publications and Reviews › RGC 21 - Publication in refereed journal › peer-review
Scopus citations: 3- 2008
A PTAS for the k-consensus structures problem under squared Euclidean distance
Li, S. C., Ng, Y. K. & Zhang, L., Dec 2008, In: Algorithms. 1, 2, p. 43-51Research output: Journal Publications and Reviews › RGC 21 - Publication in refereed journal › peer-review
Scopus citations: 2Fragment-HMM: A new approach to protein structure prediction
Shuai, C. L., Bu, D., Xu, J. & Li, M., Nov 2008, In: Protein Science. 17, 11, p. 1925-1934Research output: Journal Publications and Reviews › RGC 21 - Publication in refereed journal › peer-review
Scopus citations: 51Discriminative learning for protein conformation sampling
Zhao, F., Li, S., Sterner, B. W. & Xu, J., Oct 2008, In: Proteins: Structure, Function and Genetics. 73, 1, p. 228-240Research output: Journal Publications and Reviews › RGC 21 - Publication in refereed journal › peer-review
Scopus citations: 35Designing succinct structural alphabets
Li, S. C., Bu, D., Gao, X., Xu, J. & Li, M., Jul 2008, In: Bioinformatics. 24, 13Research output: Journal Publications and Reviews › RGC 21 - Publication in refereed journal › peer-review
Scopus citations: 10Consensus Approaches to Protein Structure Prediction
Bu, D., Li, S., Gao, X., Yu, L., Xu, J. & Li, M., 21 Apr 2008, Machine Learning in Bioinformatics. John Wiley & Sons, Inc., p. 189-208Research output: Chapters, Conference Papers, Creative and Literary Works › RGC 12 - Chapter in an edited book (Author) › peer-review
Scopus citations: 1