Prof. LI Shuaicheng (李帥成)

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Research Output

  1. 2018
  2. Published

    Population genomics of finless porpoises reveal an incipient cetacean species adapted to freshwater

    Zhou, X., Guang, X., Sun, D., Xu, S., Li, M., Seim, I. & Jie, W. & 14 others, Yang, L., Zhu, Q., Xu, J., Gao, Q., Kaya, A., Dou, Q., Chen, B., Ren, W., Li, S., Zhou, K., Gladyshev, V. N., Nielsen, R., Fang, X. & Yang, G., 2018, In: Nature Communications. 9, 1276.

    Research output: Journal Publications and Reviews › RGC 21 - Publication in refereed journal › peer-review

    Scopus citations: 115
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  3. Published

    The concordance between upper and lower respiratory microbiota in children with Mycoplasma pneumoniae pneumonia

    Dai, W., Wang, H., Zhou, Q., Feng, X., Lu, Z., Li, D. & Yang, Z. & 7 others, Liu, Y., Li, Y., Xie, G., Shen, K., Yang, Y., Zheng, Y. & Li, S., 2018, In: Emerging Microbes and Infections. 7, 92.

    Research output: Journal Publications and Reviews › RGC 21 - Publication in refereed journal › peer-review

    Scopus citations: 40
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  4. 2017
  5. Published

    Improving protein fold recognition by extracting fold-specific features from predicted residue–residue contacts

    Zhu, J., Zhang, H., Li, S. C., Wang, C., Kong, L., Sun, S. & Zheng, W.-M. & 1 others, Bu, D., 1 Dec 2017, In: Bioinformatics. 33, 23, p. 3749-3757

    Research output: Journal Publications and Reviews › RGC 21 - Publication in refereed journal › peer-review

    Scopus citations: 38
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  6. Published

    The alteration of nasopharyngeal and oropharyngeal microbiota in children with MPP and Non-MPP

    Lu, Z., Dai, W., Liu, Y., Zhou, Q., Wang, H., Li, D. & Yang, Z. & 4 others, Li, Y., Xie, G., Li, S. & Zheng, Y., Dec 2017, In: Genes. 8, 12, 380.

    Research output: Journal Publications and Reviews › RGC 21 - Publication in refereed journal › peer-review

    Scopus citations: 12
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  7. Published

    Search for More Effective Microsatellite Markers for Forensics with Next-Generation Sequencing

    Tan, B., Zhao, Z., Zhang, Z., Li, S. & Li, S. C., Jul 2017, In: IEEE Transactions on Nanobioscience. 16, 5, p. 375-381 7942045.

    Research output: Journal Publications and Reviews › RGC 21 - Publication in refereed journal › peer-review

    Scopus citations: 2
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  8. Accepted/In press/Filed

    Method for Next Generation Sequencing based Genetic Testing

    TAN, B. (Inventor), ZHAO, Z. (Inventor) & LI, S. (Inventor), 9 May 2017, (Accepted/In press/Filed) Priority No. 15/590,120

    Research output: Patents, Agreements and Assignments › RGC 51 - Patents (CityUHK)

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  9. Published

    Identification of MicroRNA Targets of Capsicum spp. Using Mirtrans—a Trans-Omics Approach

    Zhang, L., Qin, C., Mei, J., Chen, X., Wu, Z., Luo, X. & Cheng, J. & 3 others, Tang, X., Hu, K. & Li, S. C., 10 Apr 2017, In: Frontiers in Plant Science. 8, 495.

    Research output: Journal Publications and Reviews › RGC 21 - Publication in refereed journal › peer-review

    Scopus citations: 9
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  10. Published

    Genome of the pitcher plant Cephalotus reveals genetic changes associated with carnivory

    Fukushima, K., Fang, X., Alvarez-Ponce, D., Cai, H., Carretero-Paulet, L., Chen, C. & Chang, T.-H. & 26 others, Farr, K. M., Fujita, T., Hiwatashi, Y., Hoshi, Y., Imai, T., Kasahara, M., Librado, P., Mao, L., Mori, H., Nishiyama, T., Nozawa, M., Pálfalvi, G., Pollard, S. T., Rozas, J., Sánchez-Gracia, A., Sankoff, D., Shibata, T. F., Shigenobu, S., Sumikawa, N., Uzawa, T., Xie, M., Zheng, C., Pollock, D. D., Albert, V. A., Li, S. & Hasebe, M., 6 Feb 2017, In: Nature Ecology and Evolution. 1, 3, 0059.

    Research output: Journal Publications and Reviews › RGC 21 - Publication in refereed journal › peer-review

    Scopus citations: 96
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  11. Published

    Eliminating heterozygosity from reads through coverage normalization

    Zhao, Z., Ng, Y. K., Fang, X. & Li, S., 17 Jan 2017, Proceedings - 2016 IEEE International Conference on Bioinformatics and Biomedicine, BIBM 2016. Tian, T., Jiang, Q., Liu, Y., Burrage, K., Song, J., Wang, Y., Hu, Morishita, S., Zhu, Q. & Wang, G. (eds.). Institute of Electrical and Electronics Engineers, Inc., p. 174-177 7822514. (IEEE International Conference on Bioinformatics and Biomedicine-BIBM).

    Research output: Chapters, Conference Papers, Creative and Literary Works › RGC 32 - Refereed conference paper (with host publication) › peer-review

    Scopus citations: 1
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  12. Published

    More accurate models for detecting gene-gene interactions from public expression compendia

    Zhang, L., Chen, J. X. & Li, S., 17 Jan 2017, Proceedings - 2016 IEEE International Conference on Bioinformatics and Biomedicine, BIBM 2016. Institute of Electrical and Electronics Engineers, Inc., p. 1871-1878 7822804

    Research output: Chapters, Conference Papers, Creative and Literary Works › RGC 32 - Refereed conference paper (with host publication) › peer-review

    Scopus citations: 2
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  13. Published

    Core-genome scaffold comparison reveals the prevalence that inversion events are associated with pairs of inverted repeats

    Wang, D., Li, S., Guo, F., Ning, K. & Wang, L., 2017, In: BMC Genomics. 18, 268.

    Research output: Journal Publications and Reviews › RGC 21 - Publication in refereed journal › peer-review

    Scopus citations: 10
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  14. Published

    Dynamic oropharyngeal and faecal microbiota during treatment in infants hospitalized for bronchiolitis compared with age-matched healthy subjects

    Hu, Q., Dai, W., Zhou, Q., Fu, D., Zheng, Y., Wang, W. & Liu, Y. & 6 others, Yang, Q., Dai, D., Liu, S., Liu, G., Li, S. & Wen, F., 2017, In: Scientific Reports. 7, 1, 11266.

    Research output: Journal Publications and Reviews › RGC 21 - Publication in refereed journal › peer-review

    Scopus citations: 10
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  15. Published

    The SNP-set based association study identifies ITGA1 as a susceptibility gene of attention-deficit/hyperactivity disorder in Han Chinese

    Liu, L., Zhang, L., Li, H. M., Wang, Z. R., Xie, X. F., Mei, J. P. & Jin, J. L. & 9 others, Shi, J., Sun, L., Li, S. C., Tan, Y. L., Yang, L., Wang, J., Yang, H. M., Qian, Q. J. & Wang, Y. F., 2017, In: Translational Psychiatry. 7, e1201.

    Research output: Journal Publications and Reviews › RGC 21 - Publication in refereed journal › peer-review

    Scopus citations: 8
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  16. 2016
  17. Published

    Finding more effective microsatellite markers for forensics

    Tan, B., Zhang, Z., Zhao, Z., Li, S. & Li, S. C., Dec 2016, Proceedings : 2016 IEEE International Conference on Bioinformatics and Biomedicine. Tian, T., Jiang, Q., Liu, Y., Burrage, K., Song, J., Wang, Y., Hu, X., Morishita, S., Zhu, Q. & Wang, G. (eds.). Institute of Electrical and Electronics Engineers, Inc., p. 658-663

    Research output: Chapters, Conference Papers, Creative and Literary Works › RGC 32 - Refereed conference paper (with host publication) › peer-review

    Scopus citations: 1
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  18. Published

    Insights into the transmission of respiratory infectious diseases through empirical human contact networks

    Huang, C., Liu, X., Sun, S., Li, S. C., Deng, M., He, G. & Zhang, H. & 4 others, Wang, C., Zhou, Y., Zhao, Y. & Bu, D., 16 Aug 2016, In: Scientific Reports. 6, 31484.

    Research output: Journal Publications and Reviews › RGC 21 - Publication in refereed journal › peer-review

    Scopus citations: 14
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  19. Published

    Protein–protein interface prediction based on hexagon structure similarity

    Guo, F., Ding, Y., Li, S. C., Shen, C. & Wang, L., Aug 2016, In: Computational Biology and Chemistry. 63, p. 83-88

    Research output: Journal Publications and Reviews › RGC 21 - Publication in refereed journal › peer-review

    Scopus citations: 14
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  20. Published

    Mycoplasma pneumoniae and Streptococcus pneumoniae caused different microbial structure and correlation network in lung microbiota

    Wang, H., Dai, W., Qiu, C., Li, S., Wang, W., Xu, J. & Li, Z. & 8 others, Wang, H., Li, Y., Yang, Z., Feng, X., Zhou, Q., Han, L., Li, Y. & Zheng, Y., Jun 2016, In: Journal of Thoracic Disease. 8, 6, p. 1316-1322

    Research output: Journal Publications and Reviews › RGC 21 - Publication in refereed journal › peer-review

    Scopus citations: 19
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  21. Published

    Improving residue-residue contact prediction via low-rank and sparse decomposition of residue correlation matrix

    Zhang, H., Gao, Y., Deng, M., Wang, C., Zhu, J., Li, S. C. & Zheng, W.-M. & 1 others, Bu, D., 25 Mar 2016, In: Biochemical and Biophysical Research Communications. 472, 1, p. 217-222

    Research output: Journal Publications and Reviews › RGC 21 - Publication in refereed journal › peer-review

    Scopus citations: 19
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  22. Published

    FALCON: A high-throughput protein structure prediction server based on remote homologue recognition

    Wang, C., Zhang, H., Zheng, W.-M., Xu, D., Zhu, J., Wang, B. & Ning, K. & 3 others, Sun, S., Li, S. C. & Bu, D., 1 Feb 2016, In: Bioinformatics. 32, 3, p. 462-464

    Research output: Journal Publications and Reviews › RGC 21 - Publication in refereed journal › peer-review

    Scopus citations: 33
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  23. Published

    A comprehensive characterization of simple sequence repeats in pepper genomes provides valuable resources for marker development in Capsicum

    Cheng, J., Zhao, Z., Li, B., Qin, C., Wu, Z., Trejo-Saavedra, D. L. & Luo, X. & 4 others, Cui, J., Rivera-Bustamante, R. F., Li, S. & Hu, K., 7 Jan 2016, In: Scientific Reports. 6, 18919.

    Research output: Journal Publications and Reviews › RGC 21 - Publication in refereed journal › peer-review

    Scopus citations: 68
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