Prof. LI Shuaicheng (李帥成)

Microbiome Resilience and Health Implications for People in Half-Year Travel

Cheng, M., Liu, H., Han, M., Li, S. C., Bu, D., Sun, S. & Hu, Z. & 14 others, Yang, P., Wang, R., Liu, Y., Chen, F., Peng, J., Peng, H., Song, H., Xia, Y., Chu, L., Zhou, Q., Guan, F., Wu, J., Tan, G. & Ning, K., Feb 2022, In: Frontiers in Immunology. 13, 848994.

Research output: Journal Publications and Reviews › RGC 21 - Publication in refereed journal › peer-review

Scopus citations: 5

PRCTC: a machine learning model for prediction of response to corticosteroid therapy in COVID-19 patients

Gao, Y., Xiong, X., Jiao, X., Yu, Y., Chi, J., Zhang, W. & Chen, L. & 2 others, Li, S. & Gao, Q., 15 Jan 2022, In: Aging. 14, 1, p. 54-72

Research output: Journal Publications and Reviews › RGC 21 - Publication in refereed journal › peer-review

Scopus citations: 2

DeepHost: phage host prediction with convolutional neural network

WANG, R., ZHANG, X., WANG, J. & LI, S., Jan 2022, In: Briefings in Bioinformatics. 23, 1, bbab385.

Research output: Journal Publications and Reviews › RGC 21 - Publication in refereed journal › peer-review

Scopus citations: 27

Periodontal and Peri-Implant Microbiome Dysbiosis Is Associated With Alterations in the Microbial Community Structure and Local Stability

Zhang, Y., Li, Y., Yang, Y., Wang, Y., Cao, X., Jin, Y. & Xu, Y. & 2 others, Li, S. C. & Zhou, Q., Jan 2022, In: Frontiers in Microbiology. 12, 785191.

Research output: Journal Publications and Reviews › RGC 21 - Publication in refereed journal › peer-review

Scopus citations: 22

Somatic variant analysis suite: copy number variation clonal visualization online platform for large-scale single-cell genomics

Chen, L., Qing, Y., Li, R., Li, C., Li, H., Feng, X. & Li, S. C., Jan 2022, In: Briefings in Bioinformatics. 23, 1, bbab452.

Research output: Journal Publications and Reviews › RGC 21 - Publication in refereed journal › peer-review

Scopus citations: 7

Both simulation and sequencing data reveal coinfections with multiple SARS-CoV-2 variants in the COVID-19 pandemic

Li, Y., Jiang, Y., Li, Z., Yu, Y., Chen, J., Jia, W. & Kaow Ng, Y. & 3 others, Ye, F., Cheng Li, S. & Shen, B., 2022, In: Computational and Structural Biotechnology Journal. 20, p. 1389-1401

Research output: Journal Publications and Reviews › RGC 21 - Publication in refereed journal › peer-review

Scopus citations: 7

Cervicovaginal microbiota significantly changed for HPV-positive women with high-grade squamous intraepithelial lesion

Guo, C., Dai, W., Zhou, Q., Gui, L., Cai, H., Wu, D. & Hou, J. & 4 others, Li, C., Li, S., Du, H. & Wu, R., 2022, In: Frontiers in cellular and infection microbiology. 12, 973875.

Research output: Journal Publications and Reviews › RGC 21 - Publication in refereed journal › peer-review

Scopus citations: 11

Characterization of somatic structural variations in 528 Chinese individuals with Esophageal squamous cell carcinoma

Cui, H., Zhou, Y., Wang, F., Cheng, C., Zhang, W., Sun, R. & Zhang, L. & 20 others, Bi, Y., Guo, M., Zhou, Y., Wang, X., Ren, J., Bai, R., Ding, N., Cheng, C., Wang, L., Zhuang, X., Gao, M., Weng, Y., Wu, Y., Liu, H., Li, S., Wang, S., Cheng, X., Cui, Y., Liu, Z. & Zhan, Q., 2022, In: Nature Communications. 13, 6296.

Research output: Journal Publications and Reviews › RGC 21 - Publication in refereed journal › peer-review

Scopus citations: 9

Correction: DENSEN : a convolutional neural network for estimating chronological ages from panoramic radiographs

Wang, X., Liu, Y., Miao, X., Chen, Y., Cao, X., Zhang, Y. & Li, S. & 1 others, Zhou, Q., 2022, In: BMC Bioinformatics. 23, 1, 557.

Research output: Journal Publications and Reviews › Erratum

DENSEN: a convolutional neural network for estimating chronological ages from panoramic radiographs

Wang, X., Liu, Y., Miao, X., Chen, Y., Cao, X., Zhang, Y. & Li, S. & 1 others, Zhou, Q., 2022, In: BMC Bioinformatics. 23, Suppl 3, 426.

Research output: Journal Publications and Reviews › RGC 21 - Publication in refereed journal › peer-review

Scopus citations: 12

eSMC: a statistical model to infer admixture events from individual genomics data

Wang, Y., Zhao, Z., Miao, X., Wang, Y., Qian, X., Chen, L. & Wang, C. & 1 others, Li, S., 2022, In: BMC Genomics. 23, Supplement 4, 827.

Research output: Journal Publications and Reviews › RGC 21 - Publication in refereed journal › peer-review

Scopus citations: 1

Human papillomavirus integration perspective in small cell cervical carcinoma

Wang, X., Jia, W., Wang, M., Liu, J., Zhou, X., Liang, Z. & Zhang, Q. & 38 others, Long, S., Quzhen, S., Li, X., Tian, Q., Li, X., Sun, H., Zhao, C., Meng, S., Ning, R., Xi, L., Wang, L., Zhou, S., Zhang, J., Wu, L., Chen, Y., Liu, A., Ma, Y., Zhao, X., Cheng, X., Zhang, Q., Han, X., Pan, H., Zhang, Y., Cao, L., Wang, Y., Ling, S., Cao, L., Xing, H., Xu, C., Sui, L., Wang, S., Zhou, J., Kong, B., Xie, X., Chen, G., Li, S., Ma, D. & Li, S., 2022, In: Nature Communications. 13, 1, 5968.

Research output: Journal Publications and Reviews › RGC 21 - Publication in refereed journal › peer-review

Scopus citations: 15

The association of cervicovaginal Langerhans cells with clearance of human papillomavirus

Dai, W., Gui, L., Du, H., Li, S. & Wu, R., 2022, In: Frontiers in Immunology. 13, 918190.

Research output: Journal Publications and Reviews › RGC 21 - Publication in refereed journal › peer-review

Scopus citations: 5

Functional organization of the maternal and paternal human 4D Nucleome

Lindsly, S., Jia, W., Chen, H., Liu, S., Ronquist, S., Chen, C. & Wen, X. & 9 others, Stansbury, C., Dotson, G. A., Ryan, C., Rehemtulla, A., Omenn, G. S., Wicha, M., Li, S. C., Muir, L. & Rajapakse, I., 17 Dec 2021, In: iScience. 24, 12, 103452.

Research output: Journal Publications and Reviews › RGC 21 - Publication in refereed journal › peer-review

Scopus citations: 10

Bacterial Signatures of Paediatric Respiratory Disease: An Individual Participant Data Meta-Analysis

Broderick, D. T. J., Waite, D. W., Marsh, R. L., Camargo, C. A., Cardenas, P., Chang, A. B. & Cookson, W. O. C. & 31 others, Cuthbertson, L., Dai, W., Everard, M. L., Gervaix, A., Harris, J. K., Hasegawa, K., Hoffman, L. R., Hong, S.-J., Josset, L., Kelly, M. S., Kim, B.-S., Kong, Y., Li, S. C., Mansbach, J. M., Mejias, A., O’Toole, G. A., Paalanen, L., Pérez-Losada, M., Pettigrew, M. M., Pichon, M., Ramilo, O., Ruokolainen, L., Sakwinska, O., Seed, P. C., van der Gast, C. J., Wagner, B. D., Yi, H., Zemanick, E. T., Zheng, Y., Pillarisetti, N. & Taylor, M. W., Dec 2021, In: Frontiers in Microbiology. 12, 711134.

Research output: Journal Publications and Reviews › RGC 21 - Publication in refereed journal › peer-review

Scopus citations: 8

Longitudinal virological changes and underlying pathogenesis in hospitalized COVID-19 patients in Guangzhou, China

Li, Z., Li, Y., Sun, R., Li, S., Chen, L., Zhan, Y. & Xie, M. & 20 others, Yang, J., Wang, Y., Zhu, A., Gu, G., Yu, L., Li, S., Liu, T., Chen, Z., Jian, W., Jiang, Q., Su, X., Gu, W., Chen, L., Cheng, J., Zhao, J., Lu, W., Zheng, J., Li, S., Zhong, N. & Ye, F., Dec 2021, In: Science China Life Sciences. 64, 12, p. 2129-2143

Research output: Journal Publications and Reviews › RGC 21 - Publication in refereed journal › peer-review

Scopus citations: 5

SpecHap: a diploid phasing algorithm based on spectral graph theory

YU, Y., Chen, L., Miao, X. & Li, S. C., 8 Nov 2021, In: Nucleic Acids Research. 49, 19, e114.

Research output: Journal Publications and Reviews › RGC 21 - Publication in refereed journal › peer-review

Scopus citations: 6

Deep learning model reveals potential risk genes for ADHD, especially Ephrin receptor gene EPHA5

Liu, L., Feng, X., Li, H., Li, S. C., Qian, Q. & Wang, Y., Nov 2021, In: Briefings in Bioinformatics. 22, 6, bbab207.

Research output: Journal Publications and Reviews › RGC 21 - Publication in refereed journal › peer-review

Scopus citations: 14

Differential perturbations of gut microbial profiles and co-occurrence networks among phases of methamphetamine-induced conditioned place preference

Wang, Y., Zhang, J., Deji, C., Fan, J., Miao, X., Li, S. & Zeng, X. & 1 others, Guan, F., Nov 2021, In: Journal of Neuroscience Research. 99, 11, p. 2860-2873 14 p.

Research output: Journal Publications and Reviews › RGC 21 - Publication in refereed journal › peer-review

Scopus citations: 10

Resolving complex structures at oncovirus integration loci with conjugate graph

Jia, W., Xu, C. & Li, S. C., Nov 2021, In: Briefings in Bioinformatics. 22, 6, bbab359.

Research output: Journal Publications and Reviews › RGC 21 - Publication in refereed journal › peer-review

Scopus citations: 5