Prof. LI Shuaicheng (李帥成)
Research Output
- 2019
- Published
DeepMF: deciphering the latent patterns in omics profiles with a deep learning method
Chen, L., Xu, J. & Li, S. C., 2019, In: BMC Bioinformatics. 20, Suppl 23, 648.Research output: Journal Publications and Reviews › RGC 21 - Publication in refereed journal › peer-review
Scopus citations: 16 - Published
Discrepant gut microbiota markers for the classification of obesity-related metabolic abnormalities
Zeng, Q., Li, D., He, Y., Li, Y., Yang, Z., Zhao, X. & Liu, Y. & 17 others, , 2019, In: Scientific Reports. 9, 13424.Research output: Journal Publications and Reviews › RGC 21 - Publication in refereed journal › peer-review
Scopus citations: 273 - Published
Large-scale 3D chromatin reconstruction from chromosomal contacts
Zhang, Y., Liu, W., Lin, Y., Ng, Y. K. & Li, S., 2019, In: BMC Genomics. 20, Suppl. 2, 186.Research output: Journal Publications and Reviews › RGC 21 - Publication in refereed journal › peer-review
Scopus citations: 9 - Published
LEMON: a method to construct the local strains at horizontal gene transfer sites in gut metagenomics
Li, C., Jiang, Y. & Li, S., 2019, In: BMC Bioinformatics. 20, Suppl 23, 12 p., 702.Research output: Journal Publications and Reviews › RGC 21 - Publication in refereed journal › peer-review
Scopus citations: 10 - Published
MIRIA: a webserver for statistical, visual and meta-analysis of RNA editing data in mammals
Feng, X., Wang, Z., Li, H. & Li, S. C., 2019, In: BMC Bioinformatics. 20, Suppl 24, 596.Research output: Journal Publications and Reviews › RGC 21 - Publication in refereed journal › peer-review
Scopus citations: 3 - Published
SpliceFinder: ab initio prediction of splice sites using convolutional neural network
Wang, R., Wang, Z., Wang, J. & Li, S., 2019, In: BMC Bioinformatics. 20, Supp. 23, 652.Research output: Journal Publications and Reviews › RGC 21 - Publication in refereed journal › peer-review
Scopus citations: 47 - 2018
- Online published
Origin and evolution of qingke barley in Tibet
Zeng, X., Guo, Y., Xu, Q., Mascher, M., Guo, G., Li, S. & Mao, L. & 24 others, , 21 Dec 2018, (Online published) In: Nature Communications. 9, 5433.Research output: Journal Publications and Reviews › RGC 21 - Publication in refereed journal › peer-review
Scopus citations: 149 - Published
Coding mutations in NUS1 contribute to Parkinson's disease
Guo, J.-F., Zhang, L., Li, K., Mei, J.-P., Xue, J., Chen, J. & Tang, X. & 33 others, , 6 Nov 2018, In: PNAS: Proceedings of the National Academy of Sciences of the United States of America. 115, 45, p. 11567-11572Research output: Journal Publications and Reviews › RGC 21 - Publication in refereed journal › peer-review
Scopus citations: 73 - Published
Alterations of Gut Microbiota in Cholestatic Infants and Their Correlation With Hepatic Function
Guo, C., Li, Y., Wang, P., Li, Y., Qiu, C., Li, M. & Wang, D. & 6 others, , Nov 2018, In: Frontiers in Microbiology. 9, 2682.Research output: Journal Publications and Reviews › RGC 21 - Publication in refereed journal › peer-review
Scopus citations: 32 - Published
Guest Editorial for the 15th Asia Pacific Bioinformatics Conference
Wang, L., Li, S. C. & Chen, Y.-P. P., Sept 2018, In: IEEE/ACM Transactions on Computational Biology and Bioinformatics. 15, 5, p. 1513-1514Research output: Journal Publications and Reviews › Editorial Preface
- Published
NGS-based likelihood ratio for identifying contributors in two- and three-person DNA mixtures
Chan Mun Wei, J., Zhao, Z., Li, S. C. & Ng, Y. K., Jun 2018, In: Computational Biology and Chemistry. 74, p. 428-433Research output: Journal Publications and Reviews › RGC 21 - Publication in refereed journal › peer-review
Scopus citations: 3 - Published
IsoRef improves the reference-based transcriptome assembly accuracy for RNA-seq data
Ao, X., Zhao, Z. & Li, S., Mar 2018, Proceedings - 10th International Conference on Bioinformatics and Computational Biology (BICOB 2018). Al-Mubaid, H., Ding, Q. & Eulenstein, O. (eds.). The International Society for Computers and Their Applications (ISCA), p. 148-153Research output: Chapters, Conference Papers, Creative and Literary Works › RGC 32 - Refereed conference paper (with host publication) › peer-review
- Published
In silico design of MHC class I high binding affinity peptides through motifs activation map
Xiao, Z., Zhang, Y., Yu, R., Chen, Y., Jiang, X., Wang, Z. & Li, S., 2018, In: BMC Bioinformatics. 19, Suppl 19, 516.Research output: Journal Publications and Reviews › RGC 21 - Publication in refereed journal › peer-review
Scopus citations: 8 - Published
KDiamend: a package for detecting key drivers in a molecular ecological network of disease
Lyu, M., Chen, J., Jiang, Y., Dong, W., Fang, Z. & Li, S., 2018, In: BMC Systems Biology. 12, Suppl 1, 5.Research output: Journal Publications and Reviews › RGC 21 - Publication in refereed journal › peer-review
Scopus citations: 4 - Published
Microbiota Composition in Upper Respiratory Tracts of Healthy Children in Shenzhen, China, Differed with Respiratory Sites and Ages
Wang, H., Dai, W., Feng, X., Zhou, Q., Wang, H., Yang, Y. & Li, S. & 1 others, , 2018, In: BioMed Research International. 2018, 6515670.Research output: Journal Publications and Reviews › RGC 21 - Publication in refereed journal › peer-review
Scopus citations: 34 - Published
Placing segments on parallel arcs
Ng, Y. K., Jia, W. & Li, S. C., 2018, Combinatorial Algorithms: 29th International Workshop, IWOCA 2018, Proceedings. Iliopoulos, C., Leong, H. W. & Sung, W.-K. (eds.). Springer International Publishing AG, p. 298-310 (Lecture Notes in Computer Science; vol. 10979).Research output: Chapters, Conference Papers, Creative and Literary Works › RGC 32 - Refereed conference paper (with host publication) › peer-review
- Published
Population genomics of finless porpoises reveal an incipient cetacean species adapted to freshwater
Zhou, X., Guang, X., Sun, D., Xu, S., Li, M., Seim, I. & Jie, W. & 14 others, , 2018, In: Nature Communications. 9, 1276.Research output: Journal Publications and Reviews › RGC 21 - Publication in refereed journal › peer-review
Scopus citations: 114 - Published
The concordance between upper and lower respiratory microbiota in children with Mycoplasma pneumoniae pneumonia
Dai, W., Wang, H., Zhou, Q., Feng, X., Lu, Z., Li, D. & Yang, Z. & 7 others, , 2018, In: Emerging Microbes and Infections. 7, 92.Research output: Journal Publications and Reviews › RGC 21 - Publication in refereed journal › peer-review
Scopus citations: 39 - 2017
- Published
Improving protein fold recognition by extracting fold-specific features from predicted residue–residue contacts
Zhu, J., Zhang, H., Li, S. C., Wang, C., Kong, L., Sun, S. & Zheng, W.-M. & 1 others, , 1 Dec 2017, In: Bioinformatics. 33, 23, p. 3749-3757Research output: Journal Publications and Reviews › RGC 21 - Publication in refereed journal › peer-review
Scopus citations: 38 - Published
The alteration of nasopharyngeal and oropharyngeal microbiota in children with MPP and Non-MPP
Lu, Z., Dai, W., Liu, Y., Zhou, Q., Wang, H., Li, D. & Yang, Z. & 4 others, , Dec 2017, In: Genes. 8, 12, 380.Research output: Journal Publications and Reviews › RGC 21 - Publication in refereed journal › peer-review
Scopus citations: 12