Prof. LI Shuaicheng (李帥成)

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Research Output

  1. 2020
  2. Published

    Establishing high-accuracy biomarkers for colorectal cancer by comparing fecal microbiomes in patients with healthy families

    Yang, J., Li, D., Yang, Z., Dai, W., Feng, X., Liu, Y. & Jiang, Y. & 17 others, Li, P., Li, Y., Tang, B., Zhou, Q., Qiu, C., Zhang, C., Xu, X., Feng, S., Wang, D., Wang, H., Wang, W., Zheng, Y., Zhang, L., Wang, W., Zhou, K., Li, S. & Yu, P., 2020, In: Gut Microbes. 11, 4, p. 918-929

    Research output: Journal Publications and Reviews › RGC 21 - Publication in refereed journal › peer-review

    Scopus citations: 46
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  3. Published

    Heterogeneity of immune microenvironment in ovarian cancer and its clinical significance: a retrospective study

    Gao, Y., Chen, L., Cai, G., Xiong, X., Wu, Y., Ma, D. & Li, S. C. & 1 others, Gao, Q., 2020, In: OncoImmunology. 9, 1, e1760067.

    Research output: Journal Publications and Reviews › RGC 21 - Publication in refereed journal › peer-review

    Scopus citations: 31
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  4. Published

    I-Impute: a self-consistent method to impute single cell RNA sequencing data

    Feng, X., Chen, L., Wang, Z. & Li, S. C., 2020, In: BMC Genomics. 21, Suppl. 10, 618.

    Research output: Journal Publications and Reviews › RGC 21 - Publication in refereed journal › peer-review

    Scopus citations: 7
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  5. Published

    LDscaff: LD-based scaffolding of de novo genome assemblies

    Zhao, Z., Zhou, Y., Wang, S., Zhang, X., Wang, C. & Li, S., 2020, In: BMC Bioinformatics. 21, Suppl 21, 570.

    Research output: Journal Publications and Reviews › RGC 21 - Publication in refereed journal › peer-review

    Scopus citations: 3
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  6. Published

    Understanding Horizontal Gene Transfer network in human gut microbiota

    Li, C., Chen, J. & Li, S. C., 2020, In: Gut Pathogens. 12, 33.

    Research output: Journal Publications and Reviews › RGC 21 - Publication in refereed journal › peer-review

    Scopus citations: 19
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  7. 2019
  8. Published

    Analysis and comparison of long non-coding RNAs expressed in the ovaries of Meishan and Yorkshire pigs

    Wang, Z., Yang, Y., Li, S., Li, K. & Tang, Z., Dec 2019, In: Animal Genetics. 50, 6, p. 660-669

    Research output: Journal Publications and Reviews › RGC 21 - Publication in refereed journal › peer-review

    Scopus citations: 5
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  9. Published

    Resilience of human gut microbial communities for the long stay with multiple dietary shifts

    Liu, H., Han, M., Li, S. C., Tan, G., Sun, S., Hu, Z. & Yang, P. & 13 others, Wang, R., Liu, Y., Chen, F., Peng, J., Peng, H., Song, H., Xia, Y., Chu, L., Zhou, Q., Guan, F., Wu, J., Bu, D. & Ning, K., Dec 2019, In: Gut. 68, 12, p. 2254-2255

    Research output: Journal Publications and Reviews › Letter › peer-review

    Scopus citations: 40
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  10. Published

    Corrigendum: SCDevDB: A Database for Insights Into Single-Cell Gene Expression Profiles During Human Developmental Processes

    Wang, Z., Feng, X. & Li, S. C., Nov 2019, In: Frontiers in Genetics. 10, 1173.

    Research output: Journal Publications and Reviews › Erratum

    Scopus citations: 6
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  11. Published

    Intestinal Bacteroides sp. Imbalance Associated With the Occurrence of Childhood Undernutrition in China

    Li, D., Li, Y., Dai, W., Wang, H., Qiu, C., Feng, S. & Zhou, Q. & 10 others, Wang, W., Feng, X., Yao, K., Liu, Y., Yang, Y., Yang, Z., Xu, X., Li, S., Wei, J. & Zhou, K., Nov 2019, In: Frontiers in Microbiology. 10, 2635.

    Research output: Journal Publications and Reviews › RGC 21 - Publication in refereed journal › peer-review

    Scopus citations: 10
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  12. Published

    LysoPhD: predicting functional prophages in bacterial genomes from high-throughput sequencing

    Niu, Q., Peng, S.-L., Zhang, X.-L.-L., Li, S.-C., Xu, Y., Xie, X.-C. & Tong, Y.-G., Nov 2019, Proceedings - 2019 IEEE International Conference on Bioinformatics and Biomedicine. Yoo, I., Bi, J. & Hu, X. (eds.). Institute of Electrical and Electronics Engineers, Inc., p. 288-292 8983280. (Proceedings - IEEE International Conference on Bioinformatics and Biomedicine-BIBM).

    Research output: Chapters, Conference Papers, Creative and Literary Works › RGC 32 - Refereed conference paper (with host publication) › peer-review

    Scopus citations: 1
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  13. Published

    D-GPM: A Deep Learning Method for Gene Promoter Methylation Inference

    Pan, X., Liu, B., Wen, X., Liu, Y., Zhang, X., Li, S. & Li, S., Oct 2019, In: Genes. 10, 10, 807.

    Research output: Journal Publications and Reviews › RGC 21 - Publication in refereed journal › peer-review

    Scopus citations: 10
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  14. Published

    Distinct Gut Microbiota Composition and Functional Category in Children With Cerebral Palsy and Epilepsy

    Huang, C., Li, Y., Feng, X., Li, D., Li, X., Ouyang, Q. & Dai, W. & 7 others, Wu, G., Zhou, Q., Wang, P., Zhou, K., Xu, X., Li, S. & Peng, Y., Oct 2019, In: Frontiers in Pediatrics. 7, 394.

    Research output: Journal Publications and Reviews › RGC 21 - Publication in refereed journal › peer-review

    Scopus citations: 51
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  15. Published

    DNA Methylation Markers for Pan-Cancer Prediction by Deep Learning

    Liu, B., Liu, Y., Pan, X., Li, M., Yang, S. & Li, S. C., Oct 2019, In: Genes. 10, 10, 778.

    Research output: Journal Publications and Reviews › RGC 21 - Publication in refereed journal › peer-review

    Scopus citations: 63
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  16. Published

    SCDevDB: A Database for Insights Into Single-Cell Gene Expression Profiles During Human Developmental Processes

    Wang, Z., Feng, X. & Li, S. C., Sept 2019, In: Frontiers in Genetics. 10, 903.

    Research output: Journal Publications and Reviews › RGC 21 - Publication in refereed journal › peer-review

    Scopus citations: 6
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  17. Published

    An integrated respiratory microbial gene catalogue to better understand the microbial aetiology of Mycoplasma pneumoniae pneumonia

    Dai, W., Wang, H., Zhou, Q., Li, D., Feng, X., Yang, Z. & Wang, W. & 15 others, Qiu, C., Lu, Z., Xu, X., Lyu, M., Xie, G., Li, Y., Bao, Y., Liu, Y., Shen, K., Yao, K., Feng, X., Yang, Y., Zhou, K., Li, S. & Zheng, Y., Aug 2019, In: GigaScience. 8, 8, 14 p., giz093.

    Research output: Journal Publications and Reviews › RGC 21 - Publication in refereed journal › peer-review

    Scopus citations: 19
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  18. Published

    Genome-Wide Investigation and Functional Analysis of Sus scrofa RNA Editing Sites across Eleven Tissues

    Wang, Z., Feng, X., Tang, Z. & Li, S. C., Jul 2019, In: Genes. 10, 7, 520.

    Research output: Journal Publications and Reviews › Comment/debate

    Scopus citations: 1
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  19. Published

    Lung Microbiota and Pulmonary Inflammatory Cytokines Expression Vary in Children With Tracheomalacia and Adenoviral or Mycoplasma pneumoniae Pneumonia

    Wang, H., Zhou, Q., Dai, W., Feng, X., Lu, Z., Yang, Z. & Liu, Y. & 9 others, Xie, G., Yang, Y., Shen, K., Li, Y., Li, S. C., Xu, X., Shen, Y., Li, D. & Zheng, Y., Jun 2019, In: Frontiers in Pediatrics. 7, 265.

    Research output: Journal Publications and Reviews › RGC 21 - Publication in refereed journal › peer-review

    Scopus citations: 22
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  20. Published

    Genome-Wide Investigation and Functional Analysis of Sus scrofa RNA Editing Sites across Eleven Tissues

    Wang, Z., Feng, X., Tang, Z. & Li, S. C., May 2019, In: Genes. 10, 5, 327.

    Research output: Journal Publications and Reviews › RGC 21 - Publication in refereed journal › peer-review

    Scopus citations: 15
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  21. Published

    A draft genome assembly of the solar-powered sea slug Elysia chlorotica

    Cai, H., Li, Q., Fang, X., Li, J., Curtis, N. E., Altenburger, A. & Shibata, T. & 11 others, Feng, M., Maeda, T., Schwartz, J. A., Shigenobu, S., Lundholm, N., Nishiyama, T., Yang, H., Hasebe, M., Li, S., Pierce, S. K. & Wang, J., 2019, In: Scientific data. 6, 190022.

    Research output: Journal Publications and Reviews › RGC 21 - Publication in refereed journal › peer-review

    Scopus citations: 37
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  22. Published

    A unified STR profiling system across multiple species with whole genome sequencing data

    Liu, Y., Xu, J., Chen, M., Wang, C. & Li, S., 2019, In: BMC Bioinformatics. 20, 671.

    Research output: Journal Publications and Reviews › RGC 21 - Publication in refereed journal › peer-review

    Scopus citations: 5
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