Prof. LI Shuaicheng (李帥成)

Research Output

  1. 2023
  2. Published

    Gut microbiota characteristics in children with cerebral palsy

    Li, Y. & Li, S. C., 2023, Diet and Nutrition in Neurological Disorders. Martin, C. R., Patel, V. B. & Preedy, V. R. (eds.). ELSEVIER, p. 321-334

    Research output: Chapters, Conference Papers, Creative and Literary WorksRGC 12 - Chapter in an edited book (Author)peer-review

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  3. Published

    On triangle inequalities of correlation-based distances for gene expression profiles

    Chen, J., Ng, Y. K., Lin, L., Zhang, X. & Li, S., 2023, In: BMC Bioinformatics. 24, 40.

    Research output: Journal Publications and ReviewsRGC 21 - Publication in refereed journalpeer-review

    Scopus citations: 4
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  4. 2022
  5. Published

    Manganese-coordinated mRNA vaccines with enhanced mRNA expression and immunogenicity induce robust immune responses against SARS-CoV-2 variants

    Fan, N., Chen, K., Zhu, R., Zhang, Z., Huang, H., Qin, S. & Zheng, Q. & 11 others, He, Z., He, X., Xiao, W., Zhang, Y., Gu, Y., Zhao, C., Liu, Y., Jiang, X., Li, S., Wei, Y. & Song, X., 21 Dec 2022, In: Science Advances. 8, 51

    Research output: Journal Publications and ReviewsRGC 21 - Publication in refereed journalpeer-review

    Scopus citations: 50
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  6. Published

    Spatial heterogeneity of infiltrating T cells in high-grade serous ovarian cancer revealed by multi-omics analysis

    Yang, B., Li, X., Zhang, W., Fan, J., Zhou, Y., Li, W. & Yin, J. & 19 others, Yang, X., Guo, E., Li, X., Fu, Y., Liu, S., Hu, D., Qin, X., Dou, Y., Xiao, R., Lu, F., Wang, Z., Qin, T., Wang, W., Zhang, Q., Li, S., Ma, D., Mills, G. B., Chen, G. & Sun, C., 20 Dec 2022, In: Cell Reports Medicine. 3, 12, 100856.

    Research output: Journal Publications and ReviewsRGC 21 - Publication in refereed journalpeer-review

    Scopus citations: 40
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  7. Published

    Nucleophilicity Prediction Using Graph Neural Networks

    Nie, W., Liu, D., Li, S., Yu, H. & Fu, Y., 26 Sept 2022, In: Journal of Chemical Information and Modeling. 62, 18, p. 4319-4328

    Research output: Journal Publications and ReviewsRGC 21 - Publication in refereed journalpeer-review

    Scopus citations: 8
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  8. Published

    System And Method for Enabling The Secure Storage, Transmission And Access of Genetic Data

    LI, S. (Inventor) & DONG, W. (Inventor), 20 Sept 2022, Patent No. US11,451,522, Priority No. 16/002,136

    Research output: Patents, Agreements and AssignmentsRGC 51 - Patents (CityU)

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  9. Published

    Mining bacterial NGS data vastly expands the complete genomes of temperate phages

    Zhang, X., Wang, R., Xie, X., Hu, Y., Wang, J., Sun, Q. & Feng, X. & 15 others, Lin, W., Tong, S., Yan, W., Wen, H., Wang, M., Zhai, S., Sun, C., Wang, F., Niu, Q., Kropinski, A. M., Cui, Y., Jiang, X., Peng, S., Li, S. & Tong, Y., Sept 2022, In: NAR Genomics and Bioinformatics. 4, 3, lqac057.

    Research output: Journal Publications and ReviewsRGC 21 - Publication in refereed journalpeer-review

    Scopus citations: 10
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  10. Published

    SPROUT: spectral sparsification helps restore the spatial structure at single-cell resolution

    Wang, J., Li, S., Chen, L. & Li, S. C., Sept 2022, In: NAR Genomics and Bioinformatics. 4, 3, lqac069.

    Research output: Journal Publications and ReviewsRGC 21 - Publication in refereed journalpeer-review

    Scopus citations: 3
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  11. Published

    Detecting TAD-like domains from RNA-associated interactions

    Zhang, Y. W., Chen, L. & Li, S. C., 26 Aug 2022, In: Nucleic Acids Research. 50, 15, e88.

    Research output: Journal Publications and ReviewsRGC 21 - Publication in refereed journalpeer-review

    Scopus citations: 8
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  12. Published

    Profiling the peripheral blood T cell receptor repertoires of gastric cancer patients

    Wang, M., Gao, P., Ren, L., Duan, J., Yang, S., Wang, H. & Wang, H. & 5 others, Sun, J., Gao, X., Li, B., Li, S. & Su, W., 28 Jul 2022, In: Frontiers in Immunology. 13, 9 p., 848113.

    Research output: Journal Publications and ReviewsRGC 21 - Publication in refereed journalpeer-review

    Scopus citations: 4
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  13. Published

    Resolving single-cell copy number profiling for large datasets

    Wang, R., Zhang, Y., Wang, M., Feng, X., Wang, J. & Li, S. C., Jul 2022, In: Briefings in Bioinformatics. 23, 4, bbac264.

    Research output: Journal Publications and ReviewsRGC 21 - Publication in refereed journalpeer-review

    Scopus citations: 9
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  14. Published

    The Tibetan-Yi region is both a corridor and a barrier for human gene flow

    Zhang, Z., Zhang, Y., Wang, Y., Zhao, Z., Yang, M., Zhang, L. & Zhou, B. & 9 others, Xu, B., Zhang, H., Chen, T., Dai, W., Zhou, Y., Shi, S., Nielsen, R., Li, S. C. & Li, S., 26 Apr 2022, In: Cell Reports. 39, 4, 110720.

    Research output: Journal Publications and ReviewsRGC 21 - Publication in refereed journalpeer-review

    Scopus citations: 11
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  15. Published

    Altered metabolome and microbiome features provide clues in understanding irritable bowel syndrome and depression comorbidity

    Han, L., Zhao, L., Zhou, Y., Yang, C., Xiong, T., Lu, L. & Deng, Y. & 19 others, Luo, W., Chen, Y., Qiu, Q., Shang, X., Huang, L., Mo, Z., Huang, S., Huang, S., Liu, Z., Yang, W., Zhai, L., Ning, Z., Lin, C., Huang, T., Cheng, C., Zhong, L. L. D., Li, S., Bian, Z. & Fang, X., Apr 2022, In: ISME Journal. 16, 4, p. 983-996

    Research output: Journal Publications and ReviewsRGC 21 - Publication in refereed journalpeer-review

    Scopus citations: 58
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  16. Published

    Alteration of the respiratory microbiome in COVID-19 patients with different severities

    Li, Z., Li, Y., Li, L., Mo, X., Li, S., Xie, M. & Zhan, Y. & 11 others, Lin, Y., Li, Z., Xie, M., Chen, Z., Zhu, A., Ying, R., Yu, L., Zhao, J., Li, S. C., Cai, W. & Ye, F., Mar 2022, In: Journal of Genetics and Genomics. 49, 3, p. 258-261

    Research output: Journal Publications and ReviewsLetter

    Scopus citations: 8
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  17. Published

    Correction: Limits to the cellular control of sequestered cryptophyte prey in the marine ciliate Mesodinium rubrum

    Altenburger, A., Cai, H., Li, Q., Drumm, K., Kim, M., Zhu, Y. & Garcia-Cuetos, L. & 5 others, Zhan, X., Hansen, P. J., John, U., Li, S. & Lundholm, N., Mar 2022, In: ISME Journal. 16, 3, p. 898

    Research output: Journal Publications and ReviewsErratum

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  18. Published

    Dynamic changes of gut microbiota and hepatic functions are different among biliary atresia patients after Kasai portoenterostomy

    Li, Y., Guo, C., Zhou, Q., Dai, W., Zhang, Y., Li, M. & Wang, Y. & 4 others, Wang, P., Liu, L., Li, S. & Zhang, L., Feb 2022, In: Clinical and Translational Medicine. 12, 2, e728.

    Research output: Journal Publications and ReviewsLetter

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  19. Published

    Microbiome Resilience and Health Implications for People in Half-Year Travel

    Cheng, M., Liu, H., Han, M., Li, S. C., Bu, D., Sun, S. & Hu, Z. & 14 others, Yang, P., Wang, R., Liu, Y., Chen, F., Peng, J., Peng, H., Song, H., Xia, Y., Chu, L., Zhou, Q., Guan, F., Wu, J., Tan, G. & Ning, K., Feb 2022, In: Frontiers in Immunology. 13, 848994.

    Research output: Journal Publications and ReviewsRGC 21 - Publication in refereed journalpeer-review

    Scopus citations: 5
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  20. Published

    PRCTC: a machine learning model for prediction of response to corticosteroid therapy in COVID-19 patients

    Gao, Y., Xiong, X., Jiao, X., Yu, Y., Chi, J., Zhang, W. & Chen, L. & 2 others, Li, S. & Gao, Q., 15 Jan 2022, In: Aging. 14, 1, p. 54-72

    Research output: Journal Publications and ReviewsRGC 21 - Publication in refereed journalpeer-review

    Scopus citations: 2
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  21. Published

    DeepHost: phage host prediction with convolutional neural network

    WANG, R., ZHANG, X., WANG, J. & LI, S., Jan 2022, In: Briefings in Bioinformatics. 23, 1, bbab385.

    Research output: Journal Publications and ReviewsRGC 21 - Publication in refereed journalpeer-review

    Scopus citations: 26
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  22. Published

    Periodontal and Peri-Implant Microbiome Dysbiosis Is Associated With Alterations in the Microbial Community Structure and Local Stability

    Zhang, Y., Li, Y., Yang, Y., Wang, Y., Cao, X., Jin, Y. & Xu, Y. & 2 others, Li, S. C. & Zhou, Q., Jan 2022, In: Frontiers in Microbiology. 12, 785191.

    Research output: Journal Publications and ReviewsRGC 21 - Publication in refereed journalpeer-review

    Scopus citations: 22
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