Prof. LI Shuaicheng (李帥成)

Research Output

  1. 2023
  2. Accepted/In press/Filed

    Methods Of Detecting Congenital Heart Disease

    LI, S. (Inventor), ZHANG, W. (Inventor) & LI, M. (Inventor), 3 Nov 2023, (Accepted/In press/Filed) Priority No. 18/501,063

    Research output: Patents, Agreements and AssignmentsRGC 51 - Patents (CityU)

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  3. Published

    大數據處理流程模塊化管理方法及裝置

    XU, C. (Inventor), JIA, W. (Inventor) & LI, S. (Inventor), 13 Oct 2023, Patent No. Zl201710195401.0, Priority No. 201710195401.0

    Research output: Patents, Agreements and AssignmentsRGC 51 - Patents (CityU)

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  4. Published

    Translocation of vaginal and cervical low-abundance non-Lactobacillus bacteria notably associate with endometriosis: A pilot study

    Yang, Q., Wang, Y., Cai, H., Zhou, Q., Zeng, L., Li, S. & Du, H. & 4 others, Wei, W., Zhang, W., Dai, W. & Wu, R., Oct 2023, In: Microbial Pathogenesis. 183, 106309.

    Research output: Journal Publications and ReviewsRGC 21 - Publication in refereed journalpeer-review

    Scopus citations: 4
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  5. Published

    SpecHLA enables full-resolution HLA typing from sequencing data

    Wang, S., Wang, M., Chen, L., Pan, G., Wang, Y. & Li, S. C., 25 Sept 2023, In: Cell Reports Methods. 3, 9, 100589.

    Research output: Journal Publications and ReviewsRGC 21 - Publication in refereed journalpeer-review

    Scopus citations: 4
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  6. Published

    Heterogeneity in lung cancers by single-cell DNA sequencing

    Zhang, L., Chen, L., Li, S. C., Wang, M., Li, C., Song, T. & Ni, Y. & 5 others, Yang, Y., Liu, Z., Yao, M., Shen, B. & Li, W., Sept 2023, In: Clinical and Translational Medicine. 13, 9, e1388.

    Research output: Journal Publications and ReviewsLetter

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  7. Published

    Immune repertoire profiling reveals its clinical application potential and triggers for Neuromyelitis Optica Spectrum Disorders

    Miao, Y., Shi, Z., Zhang, W., Zhu, L., Tang, S., Chen, H. & Wang, X. & 7 others, Du, Q., Li, S., Zhang, Y., Luo, W., Jin, X., Fang, M. & Zhou, H., Sept 2023, In: Neurology: Neuroimmunology and NeuroInflammation. 10, 5, e200134.

    Research output: Journal Publications and ReviewsRGC 21 - Publication in refereed journalpeer-review

    Scopus citations: 8
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  8. Published

    Probabilistic tensor decomposition extracts better latent embeddings from single-cell multiomic data

    Wang, R. H., Wang, J. & Li, S. C., 25 Aug 2023, In: Nucleic acids research. 51, 15, e81.

    Research output: Journal Publications and ReviewsRGC 21 - Publication in refereed journalpeer-review

    Scopus citations: 4
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  9. Published

    Quantitative annotations of T-Cell repertoire specificity

    Luo, J., Wang, X., Zou, Y., Chen, L., Liu, W., Zhang, W. & Li, S. C., May 2023, In: Briefings in Bioinformatics. 24, 3, bbad175.

    Research output: Journal Publications and ReviewsRGC 21 - Publication in refereed journalpeer-review

    Scopus citations: 4
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  10. Published

    Baseline gut microbiome impacts probiotics Bacillus licheniformis CMCC63516 in modulating the gut microbiome and preventing antibiotic-associated diarrhea: A double-blind, randomized controlled trial

    Zhou, Q., Dai, W., Bao, Y., Chen, J., Han, X., Liu, C. & Hou, M. & 4 others, Yao, H., Hao, C., Li, S. & Zheng, Y., Apr 2023, In: Clinical and Translational Medicine. 13, 4, e1184.

    Research output: Journal Publications and ReviewsLetter

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  11. Published

    Was Wuhan the early epicenter of the COVID-19 pandemic?—A critique

    57 authors, including & Li, S. C., Apr 2023, In: National Science Review. 10, 4, nwac287.

    Research output: Journal Publications and ReviewsComment/debate

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  12. Published

    Protocol to analyze population structure and migration history based on human genome variation data

    Zhao, Z., Wang, Y., Zhang, Z. & Li, S. C., 17 Mar 2023, In: STAR Protocols. 4, 1, 101928.

    Research output: Journal Publications and ReviewsRGC 21 - Publication in refereed journalpeer-review

    Scopus citations: 2
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  13. Published

    Deep autoregressive generative models capture the intrinsics embedded in T-cell receptor repertoires

    Jiang, Y. & Li, S. C., Mar 2023, In: Briefings in Bioinformatics. 24, 2, bbad038.

    Research output: Journal Publications and ReviewsRGC 21 - Publication in refereed journalpeer-review

    Scopus citations: 3
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  14. Published

    IMperm: a fast and comprehensive IMmune Paired-End Reads Merger for sequencing data

    Zhang, W., Ju, J., Zhou, Y., Xiong, T., Wang, M., Li, C. & Lu, S. & 4 others, Lu, Z., Lin, L., Liu, X. & Li, S. C., Mar 2023, In: Briefings in Bioinformatics. 24, 2, 10 p., bbad080.

    Research output: Journal Publications and ReviewsRGC 21 - Publication in refereed journalpeer-review

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  15. Published

    SMURF: embedding single-cell RNA-seq data with matrix factorization preserving self-consistency

    Pu, J., Wang, B., Liu, X., Chen, L. & Li, S. C., Mar 2023, In: Briefings in Bioinformatics. 24, 2, bbad026.

    Research output: Journal Publications and ReviewsRGC 21 - Publication in refereed journalpeer-review

    Scopus citations: 3
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  16. Published

    TEINet: a deep learning framework for prediction of TCR-epitope binding specificity

    Jiang, Y., Huo, M. & Cheng Li, S., Mar 2023, In: Briefings in Bioinformatics. 24, 2, bbad086.

    Research output: Journal Publications and ReviewsRGC 21 - Publication in refereed journalpeer-review

    Scopus citations: 16
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  17. Published

    Incorporating cell hierarchy to decipher the functional diversity of single cells

    Chen, L. & Li, S. C., 25 Jan 2023, In: Nucleic acids research. 51, 2, e9.

    Research output: Journal Publications and ReviewsRGC 21 - Publication in refereed journalpeer-review

    Scopus citations: 8
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  18. Published

    TIMEDB: tumor immune micro-environment cell composition database with automatic analysis and interactive visualization

    Wang, X., Chen, L., Liu, W., Zhang, Y., Liu, D., Zhou, C. & Shi, S. & 6 others, Dong, J., Lai, Z., Zhao, B., Zhang, W., Cheng, H. & Li, S., 6 Jan 2023, In: Nucleic acids research. 51, D1, p. D1417–D1424

    Research output: Journal Publications and ReviewsRGC 21 - Publication in refereed journalpeer-review

    Scopus citations: 13
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  19. Published

    AI-assisted system improves the work efficiency of cytologists via excluding cytology-negative slides and accelerating the slide interpretation

    Du, H., Dai, W., Zhou, Q., Li, C., Li, S. C., Wang, C. & Tang, J. & 2 others, Wu, X. & Wu, R., 2023, In: Frontiers in Oncology. 13, 1290112.

    Research output: Journal Publications and ReviewsRGC 21 - Publication in refereed journalpeer-review

    Scopus citations: 3
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  20. Published

    Correction: On triangle inequalities of correlation-based distances for gene expression profiles

    Chen, J., Ng, Y. K., Lin, L., Zhang, X. & Li, S., 2023, In: BMC Bioinformatics. 23, Suppl 3, 571.

    Research output: Journal Publications and ReviewsErratum

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  21. Published

    Deciphering complex breakage-fusion-bridge genome rearrangements with Ambigram

    Li, C., Chen, L., Pan, G., Zhang, W. & Li, S. C., 2023, In: Nature Communications. 14, 5528.

    Research output: Journal Publications and ReviewsRGC 21 - Publication in refereed journalpeer-review

    Scopus citations: 2
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