Dr. LI Shuaicheng (李帥成)

Research Output

  1. 2021
  2. Published

    SuperTAD: robust detection of hierarchical topologically associated domains with optimized structural information

    Zhang, Y. W., Wang, M. B. & Li, S. C., 2021, In : Genome Biology. 22, 45.

    Research output: Journal Publications and Reviews (RGC: 21, 22, 62)21_Publication in refereed journalpeer-review

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  3. 2020
  4. Online published

    Limits to the cellular control of sequestered cryptophyte prey in the marine ciliate Mesodinium rubrum

    Altenburger, A., Cai, H., Li, Q., Drumm, K., Kim, M., Zhu, Y., Garcia-Cuetos, L. & 5 others, Zhan, X., Hansen, P. J., John, U., Li, S. & Lundholm, N., 23 Nov 2020, In : The ISME Journal.

    Research output: Journal Publications and Reviews (RGC: 21, 22, 62)21_Publication in refereed journalpeer-review

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  5. Published

    Is antibiotics prescription needed in infants with topical corticosteroids treatment for moderate-to-severe atopic dermatitis?

    Liu, Y., Zhou, Q., Dai, W., Wang, S., Liang, Y., Li, Y., Shen, C. & 7 others, Li, D., Li, Y., Jiao, L., Bian, Y., Li, S., Tang, Y. & Ma, L., Nov 2020, In : Dermatologic Therapy. 33, 6, e14215.

    Research output: Journal Publications and Reviews (RGC: 21, 22, 62)21_Publication in refereed journalpeer-review

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  6. Published

    Corrigendum: Oviz-Bio: a web-based platform for interactive cancer genomics data visualization

    Jia, W., Li, H., Li, S., Chen, L. & Li, S. C., 20 Aug 2020, In : Nucleic Acids Research. 48, 14, p. 8203-8204

    Research output: Journal Publications and Reviews (RGC: 21, 22, 62)Erratum

    Scopus citations: 1
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  7. Published

    Oviz-Bio: a web-based platform for interactive cancer genomics data visualization

    Jia, W., Li, H., Li, S., Chen, L. & Li, S. C., 2 Jul 2020, In : Nucleic Acids Research. 48, W1, p. W415-W426

    Research output: Journal Publications and Reviews (RGC: 21, 22, 62)21_Publication in refereed journalpeer-review

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  8. Published

    Corrigendum: Alterations of Gut Microbiota in Cholestatic Infants and Their Correlation With Hepatic Function

    Guo, C., Li, Y., Wang, P., Li, Y., Qiu, C., Li, M., Wang, D. & 6 others, Zhao, R., Li, D., Wang, Y., Li, S., Dai, W. & Zhang, L., Jul 2020, In : Frontiers in Microbiology. 11, 1599.

    Research output: Journal Publications and Reviews (RGC: 21, 22, 62)Erratum

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  9. Published

    Different nasopharynx and oropharynx microbiota imbalance in children with Mycoplasma pneumoniae or influenza virus infection

    Zhou, Q., Xie, G., Liu, Y., Wang, H., Yang, Y., Shen, K., Dai, W. & 2 others, Li, S. & Zheng, Y., Jul 2020, In : Microbial Pathogenesis. 144, 104189.

    Research output: Journal Publications and Reviews (RGC: 21, 22, 62)21_Publication in refereed journalpeer-review

    Scopus citations: 1
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  10. Published

    Distinct Skin Microbiota Imbalance and Responses to Clinical Treatment in Children With Atopic Dermatitis

    Liu, Y., Wang, S., Dai, W., Liang, Y., Shen, C., Li, Y., Jiao, L. & 8 others, Bian, Y., Gao, Z., Li, Y., Li, D., Li, S., Blaser, M. J., Tang, Y. & Ma, L., Jul 2020, In : Frontiers in cellular and infection microbiology. 10, 336.

    Research output: Journal Publications and Reviews (RGC: 21, 22, 62)21_Publication in refereed journalpeer-review

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  11. Published

    A comprehensive investigation of metagenome assembly by linked-read sequencing

    Zhang, L., Fang, X., Liao, H., Zhang, Z., Zhou, X., Han, L., Chen, Y. & 2 others, Qiu, Q. & Li, S. C., 2020, In : Microbiome. 8, 156.

    Research output: Journal Publications and Reviews (RGC: 21, 22, 62)21_Publication in refereed journalpeer-review

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  12. Published

    Breastfeeding restored the gut microbiota in caesarean section infants and lowered the infection risk in early life

    Guo, C., Zhou, Q., Li, M., Zhou, L., Xu, L., Zhang, Y., Li, D. & 4 others, Wang, Y., Dai, W., Li, S. & Zhang, L., 2020, In : BMC Pediatrics. 20, 532.

    Research output: Journal Publications and Reviews (RGC: 21, 22, 62)21_Publication in refereed journalpeer-review

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  13. Published

    Deep learning for HGT insertion sites recognition

    Li, C., Chen, J. & Li, S. C., 2020, In : BMC Genomics. 21, Supplement 11, 893.

    Research output: Journal Publications and Reviews (RGC: 21, 22, 62)21_Publication in refereed journalpeer-review

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  14. Published

    Donkey genomes provide new insights into domestication and selection for coat color

    Wang, C., Li, H., Guo, Y., Huang, J., Sun, Y., Min, J., Wang, J. & 43 others, Fang, X., Zhao, Z., Wang, S., Zhang, Y., Liu, Q., Jiang, Q., Wang, X., Guo, Y., Yang, C., Wang, Y., Tian, F., Zhuang, G., Fan, Y., Gao, Q., Li, Y., Ju, Z., Li, J., Li, R., Hou, M., Yang, G., Liu, G., Liu, W., Guo, J., Pan, S., Fan, G., Zhang, W., Zhang, R., Yu, J., Zhang, X., Yin, Q., Ji, C., Jin, Y., Yue, G., Liu, M., Xu, J., Liu, S., Jordana, J., Noce, A., Amills, M., Wu, D. D., Li, S., Zhou, X. & Zhong, J., 2020, In : Nature Communications. 11, 6014.

    Research output: Journal Publications and Reviews (RGC: 21, 22, 62)21_Publication in refereed journalpeer-review

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  15. Published

    Establishing high-accuracy biomarkers for colorectal cancer by comparing fecal microbiomes in patients with healthy families

    Yang, J., Li, D., Yang, Z., Dai, W., Feng, X., Liu, Y., Jiang, Y. & 17 others, Li, P., Li, Y., Tang, B., Zhou, Q., Qiu, C., Zhang, C., Xu, X., Feng, S., Wang, D., Wang, H., Wang, W., Zheng, Y., Zhang, L., Wang, W., Zhou, K., Li, S. & Yu, P., 2020, In : Gut Microbes. 11, 4, p. 918-929

    Research output: Journal Publications and Reviews (RGC: 21, 22, 62)21_Publication in refereed journalpeer-review

    Scopus citations: 4
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  16. Published

    Heterogeneity of immune microenvironment in ovarian cancer and its clinical significance: a retrospective study

    Gao, Y., Chen, L., Cai, G., Xiong, X., Wu, Y., Ma, D., Li, S. C. & 1 others, Gao, Q., 2020, In : OncoImmunology. 9, 1, e1760067.

    Research output: Journal Publications and Reviews (RGC: 21, 22, 62)21_Publication in refereed journalpeer-review

    Scopus citations: 3
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  17. Published

    I-Impute: a self-consistent method to impute single cell RNA sequencing data

    Feng, X., Chen, L., Wang, Z. & Li, S. C., 2020, In : BMC Genomics. 21, Suppl. 10, 618.

    Research output: Journal Publications and Reviews (RGC: 21, 22, 62)21_Publication in refereed journalpeer-review

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  18. Published

    LDscaff: LD-based scaffolding of de novo genome assemblies

    Zhao, Z., Zhou, Y., Wang, S., Zhang, X., Wang, C. & Li, S., 2020, In : BMC Bioinformatics. 21, Suppl 21, 570.

    Research output: Journal Publications and Reviews (RGC: 21, 22, 62)21_Publication in refereed journalpeer-review

    Scopus citations: 1
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  19. Published

    Understanding Horizontal Gene Transfer network in human gut microbiota

    Li, C., Chen, J. & Li, S. C., 2020, In : Gut Pathogens. 12, 33.

    Research output: Journal Publications and Reviews (RGC: 21, 22, 62)21_Publication in refereed journalpeer-review

    Scopus citations: 2
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  20. 2019
  21. Published

    Analysis and comparison of long non-coding RNAs expressed in the ovaries of Meishan and Yorkshire pigs

    Wang, Z., Yang, Y., Li, S., Li, K. & Tang, Z., Dec 2019, In : Animal Genetics. 50, 6, p. 660-669

    Research output: Journal Publications and Reviews (RGC: 21, 22, 62)21_Publication in refereed journalpeer-review

    Scopus citations: 1
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  22. Published

    Resilience of human gut microbial communities for the long stay with multiple dietary shifts

    Liu, H., Han, M., Li, S. C., Tan, G., Sun, S., Hu, Z., Yang, P. & 13 others, Wang, R., Liu, Y., Chen, F., Peng, J., Peng, H., Song, H., Xia, Y., Chu, L., Zhou, Q., Guan, F., Wu, J., Bu, D. & Ning, K., Dec 2019, In : Gut. 68, 12, p. 2254-2255

    Research output: Journal Publications and Reviews (RGC: 21, 22, 62)Letterpeer-review

    Scopus citations: 15
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  23. Published
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