Prof. LI Runsheng (李潤生)

Research Output

  1. 2023
  2. Published

    Nanopore sequencing identifies differentially methylated genes in the central nervous system in experimental autoimmune encephalomyelitis

    Si, W., Ni, Y., Jiang, Q., Tan, L., Sparagano, O., Li, R. & Yang, G., 15 Aug 2023, In: Journal of Neuroimmunology. 381, 578134.

    Research output: Journal Publications and Reviews (RGC: 21, 22, 62)21_Publication in refereed journalpeer-review

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  3. Published

    Transgenic IDH2R172K and IDH2R140Q zebrafish models recapitulated features of human acute myeloid leukemia

    Wang, D., Zheng, L., Cheng, B. Y. L., Sin, C., Li, R., Tsui, S. P., Yi, X., & 4 othersMa, A. C. H., He, B. L., Leung, A. Y. H. & Sun, X., 13 Apr 2023, In: Oncogene. 42, 16, p. 1272–1281 10 p.

    Research output: Journal Publications and Reviews (RGC: 21, 22, 62)21_Publication in refereed journalpeer-review

    Scopus citations: 1
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  4. Published

    Primerdiffer: a python command-line module for large-scale primer design in haplotype genotyping

    Ren, X., Shao, Y., Zhang, Y., Ni, Y., Bi, Y. & Li, R., Apr 2023, In: Bioinformatics. 39, 4, 2 p., btad188.

    Research output: Journal Publications and Reviews (RGC: 21, 22, 62)21_Publication in refereed journalpeer-review

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  5. Published

    Insect-Specific Chimeric Viruses Potentiated Antiviral Responses and Inhibited Pathogenic Alphavirus Growth in Mosquito Cells

    Tan, L., Zhang, Y., Kim, D. Y. & Li, R., Feb 2023, In: Microbiology Spectrum. 11, 1, e0361322.

    Research output: Journal Publications and Reviews (RGC: 21, 22, 62)21_Publication in refereed journalpeer-review

    Scopus citations: 1
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  6. Published

    Benchmarking of Nanopore R10.4 and R9.4.1 flow cells in single-cell whole-genome amplification and whole-genome shotgun sequencing

    Ni, Y., Liu, X., Simeneh, Z. M., Yang, M. & Li, R., 2023, In: Computational and Structural Biotechnology Journal. 21, p. 2352-2364 13 p.

    Research output: Journal Publications and Reviews (RGC: 21, 22, 62)21_Publication in refereed journalpeer-review

    Scopus citations: 8
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  7. Published

    Correction: Transgenic IDH2R172K and IDH2R140Q zebrafish models recapitulated features of human acute myeloid leukemia

    Wang, D., Zheng, L., Cheng, B. Y. L., Sin, C., Li, R., Tsui, S. P., Yi, X., & 4 othersMa, A. C. H., He, B. L., Leung, A. Y. H. & Sun, X., 2023, In: Oncogene. 42, 1331.

    Research output: Journal Publications and Reviews (RGC: 21, 22, 62)Erratum

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  8. Published

    Investigation of the First African Swine Fever Outbreak in a Domestic Pig Farm in Hong Kong

    Go, Y. Y., Ho, J. H. P., Tam, K. W. S., Kamali, M., Zhang, Y., Lau, C. C. Y., Li, S. H., & 12 othersWilson, M. T., Guo, Z., Li, R., Gu, G., Tse, M. P. Y., Hill, F. I., Batten, C., Corla, A., Flannery, J., Conan, A., Brackman, C. J. & Pfeiffer, D. U., 2023, In: Transboundary and Emerging Diseases. 2023, 1720474.

    Research output: Journal Publications and Reviews (RGC: 21, 22, 62)21_Publication in refereed journalpeer-review

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  9. Published

    Unraveling the whole genome DNA methylation profile of zebrafish kidney marrow by Oxford Nanopore sequencing

    Liu, X., Ni, Y., Wang, D., Ye, S., Yang, M., Sun, X., Leung, A. Y. H., & 1 othersLi, R., 2023, In: Scientific data. 10, p. 532

    Research output: Journal Publications and Reviews (RGC: 21, 22, 62)21_Publication in refereed journalpeer-review

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  10. 2022
  11. Published

    Highly efficient transgenesis with miniMos in Caenorhabditis briggsae

    Ding, Q., Ren, X., Li, R., Chan, L., Ho, V. W. S., Bi, Y., Xie, D., & 1 othersZhao, Z., Dec 2022, In: G3: Genes, Genomes, Genetics. 12, 12, jkac254.

    Research output: Journal Publications and Reviews (RGC: 21, 22, 62)21_Publication in refereed journalpeer-review

    Scopus citations: 1
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  12. Published

    Melatonin improves bisphenol A-induced cell apoptosis, oxidative stress and autophagy impairment via inhibition of the p38 MAPK signaling pathway in FLK-BLV cells

    Song, D., Liu, Y., Yao, Y., Liu, F., Tao, W., Zhou, X., Li, R., & 2 othersZhang, X. & Li, X., Jul 2022, In: Environmental Toxicology. 37, 7, p. 1551-1562

    Research output: Journal Publications and Reviews (RGC: 21, 22, 62)21_Publication in refereed journalpeer-review

    Scopus citations: 10
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  13. Published

    High-Resolution Metagenomics of Human Gut Microbiota Generated by Nanopore and Illumina Hybrid Metagenome Assembly

    Ye, L., Dong, N., Xiong, W., LI, J., LI, R., Heng, H., Chan, E. W. C., & 1 othersChen, S., May 2022, In: Frontiers in Microbiology. 13, 801587.

    Research output: Journal Publications and Reviews (RGC: 21, 22, 62)21_Publication in refereed journalpeer-review

    Scopus citations: 2
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  14. Published

    Genomic architecture of 5S rDNA cluster and its variations within and between species

    Ding, Q., Li, R., Ren, X., Chan, L., Ho, V. W. S., Xie, D., Ye, P., & 1 othersZhao, Z., 2022, In: BMC Genomics. 23, 238.

    Research output: Journal Publications and Reviews (RGC: 21, 22, 62)21_Publication in refereed journalpeer-review

    Scopus citations: 2
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  15. Published

    Initial characterization of gap phase introduction in every cell cycle of C. elegans embryogenesis

    Wong, M., Ho, V. W. S., Huang, X., Chan, L., Xie, D., Li, R., Ren, X., & 5 othersGuan, G., Ma, Y., Hu, B., Yan, H. & Zhao, Z., 2022, In: Frontiers in Cell and Developmental Biology. 10, 978962.

    Research output: Journal Publications and Reviews (RGC: 21, 22, 62)21_Publication in refereed journalpeer-review

    Scopus citations: 3
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  16. Published

    New mitogenomes in deep-water endemic Cocculinida and Neomphalida shed light on lineage-specific gene orders in major gastropod clades

    Zhong, Z., Lan, Y., Chen, C., Zhou, Y., Linse, K., Li, R. & Sun, J., 2022, In: Frontiers in Ecology and Evolution. 10, 973485.

    Research output: Journal Publications and Reviews (RGC: 21, 22, 62)21_Publication in refereed journalpeer-review

    Scopus citations: 4
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  17. 2021
  18. Published

    Complete genetic dissection and cell type-specific replication of old world alphaviruses, getah virus (GETV) and sagiyama virus (SAGV)

    Zhang, Y., Yu, J., Tan, L., Wang, X., Li, R. & Kim, D. Y., Nov 2021, In: Journal of Microbiology. 59, 11, p. 1044–1055

    Research output: Journal Publications and Reviews (RGC: 21, 22, 62)21_Publication in refereed journalpeer-review

    Scopus citations: 1
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  19. Published

    Comparative transcriptome and methylome analysis of the hindbrain in olive flounder (Paralichthys olivaceus) considering individual behavior-type and oxygen metabolism

    Zou, H., Shi, M., Li, R., Zhang, X. & Lu, W., Jun 2021, In: Comparative Biochemistry and Physiology - Part D: Genomics and Proteomics. 38, 100799.

    Research output: Journal Publications and Reviews (RGC: 21, 22, 62)21_Publication in refereed journalpeer-review

    Scopus citations: 5
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  20. Published

    Benchmarking Oxford Nanopore read assemblers for high-quality molluscan genomes

    Sun, J., Li, R., Chen, C., Sigwart, J. D. & Kocot, K. M., 24 May 2021, In: Philosophical Transactions of the Royal Society B: Biological Sciences. 376, 1825

    Research output: Journal Publications and Reviews (RGC: 21, 22, 62)21_Publication in refereed journalpeer-review

    Scopus citations: 13
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  21. Published

    Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic Clam

    Ip, J. C., Xu, T., Sun, J., Li, R., Chen, C., Lan, Y., Han, Z., & 7 othersZhang, H., Wei, J., Wang, H., Tao, J., Cai, Z., Qian, P. & Qiu, J., Feb 2021, In: Molecular Biology and Evolution. 38, 2, p. 502-518 17 p.

    Research output: Journal Publications and Reviews (RGC: 21, 22, 62)21_Publication in refereed journalpeer-review

    Scopus citations: 41
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  22. Published

    Hologenome analysis reveals dual symbiosis in the deep-sea hydrothermal vent snail Gigantopelta aegis

    Lan, Y., Sun, J., Chen, C., Sun, Y., Zhou, Y., Yang, Y., Zhang, W., & 9 othersLi, R., Zhou, K., Wong, W. C., Kwan, Y. H., Cheng, A., Bougouffa, S., Van Dover, C. L., Qiu, J. & Qian, P., 2021, In: Nature Communications. 12, 1165.

    Research output: Journal Publications and Reviews (RGC: 21, 22, 62)21_Publication in refereed journalpeer-review

    Scopus citations: 34
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  23. 2020
  24. Published

    New insights into Arabidopsis transcriptome complexity revealed by direct sequencing of native RNAs

    Zhang, S., Li, R., Zhang, L., Chen, S., Xie, M., Yang, L., Xia, Y., & 3 othersFoyer, C. H., Zhao, Z. & Lam, H., 20 Aug 2020, In: Nucleic Acids Research. 48, 14, p. 7700-7711 12 p.

    Research output: Journal Publications and Reviews (RGC: 21, 22, 62)21_Publication in refereed journalpeer-review

    Scopus citations: 46
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