Research output per year
Research output per year
Personal profile
Author IDs
ORCID iD: 0000-0003-1563-1844
Scopus Author ID: 55660777300
Google Scholar Profile: aIFBO38AAAAJ
Impact
Qualifications (Brief)
DVM, PhD
Biography
Dr. Li Runsheng is an Assistant Professor of Veterinary Physiology at the Department of Infectious Diseases and Public Health since Jun 2020. He received his DVM Degree from Northwest A&F University (Yangling, China) in 2008, and PhD degree in Animal Physiology from the Department of Veterinary Medicine at Nanjing Agriculture University (Nanjing, China) in 2013. Prior to his current position, he worked as a Research Assistant Professor in the Department of Biology at Hong Kong Baptist University.
Dr. Li is dedicated to interdisciplinary research involving bioinformatics and genetics. The bioinformatics part focus on developing bioinformatic toolkits for long read sequencing. The genetics part is mostly about the hybrid incompatibility research using Caenorhabditis species.
Position(s) Available
Positions available:
We have positions for PhD students interested in long-read related bioinformatics (one vacancy) and C. elegans related genetics research (one vacancy).
Research Interests/Areas
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Developing applications/pipelines to study RNA modification and alternative splicing using Nanopore long-read RNA sequencing.
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Studying inter/intra-species hybrid incompatibility using Caenorhabditis briggsae and Caenorhabditis nigoni.
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Developing toolkits for genome finishing, improvement and comparative analysis using long-read DNA sequencing.
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Developing pipeline for DNA methylation profiling and comparative analysis in Acute myeloid leukemia (AML).
Expertise related to UN Sustainable Development Goals
In 2015, UN member states agreed to 17 global Sustainable Development Goals (SDGs) to end poverty, protect the planet and ensure prosperity for all. This person’s work contributes towards the following SDG(s):
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Collaborations from the last five years
Recent external collaboration on country/territory level. Dive into details by clicking on the dots or
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Characterization of the ribosomal RNA methylase gene erm(A) and its promoter mutation in Campylobacter coli from chicken cecum
Liu, T., Liu, X., Dai, X., Huang, J., Li, R., Wang, L. & Wang, X., 16 Apr 2025, In: International Journal of Food Microbiology. 434, 111138.Research output: Journal Publications and Reviews › RGC 21 - Publication in refereed journal › peer-review
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Chromosome-level genome assembly of black carp Mylopharyngodon piceus using Nanopore and Hi-C technologies
Zhang, Y. (Co-first Author), Shao, Y. (Co-first Author), Liu, X. (Co-first Author), Zhong, L., Zhong, Z., Zeng, W., Zhang, J., Cai, W. & Li, R., Jan 2025, In: Scientific data. 12, 145.Research output: Journal Publications and Reviews › RGC 21 - Publication in refereed journal › peer-review
Open AccessFile50 Downloads (CityUHK Scholars) -
Comprehensive comparison of the third-generation sequencing tools for bacterial 6mA profiling
Lu, B. (Co-first Author), Guo, Z. (Co-first Author), Liu, X. (Co-first Author), Ni, Y., Xu, L., Huang, J., Li, T., Feng, T., Li, R. & Deng, X., 2025, In: Nature Communications. 16, 3982.Research output: Journal Publications and Reviews › RGC 21 - Publication in refereed journal › peer-review
Open AccessFile20 Downloads (CityUHK Scholars) -
Decoding the genome and epigenome of avian Escherichia coli strains by R10.4.1 nanopore sequencing
Wang, J., Liu, X., Shao, Y., Li, R. & Paudel, S., Mar 2025, In: Frontiers in Veterinary Science. 12, 1541964.Research output: Journal Publications and Reviews › RGC 21 - Publication in refereed journal › peer-review
Open AccessFile10 Downloads (CityUHK Scholars) -
Iturin A Potentiates Differentiation of Intestinal Epithelial Defense Cells by Modulating Keap1/Nrf2 Signaling to Mitigate Oxidative Damage Induced by Heat-Stable Enterotoxin B
Zan, G.-X., Qu, H.-Z., Li, X.-Y., Peng, Q.-L., Wang, X.-F., Li, R.-S., Zhao, Y.-G., Yan, H.-C., Zhou, J.-Y. & Wang, X.-Q., Apr 2025, In: Antioxidants. 14, 4, 478.Research output: Journal Publications and Reviews › RGC 21 - Publication in refereed journal › peer-review
Open AccessFile7 Downloads (CityUHK Scholars)
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GRF: Locate the Hybrid Male Sterility Related Genes in Two Closely Related Nematodes with an X-Linked Introgression Strain
LI, R. (Principal Investigator / Project Coordinator)
1/01/25 → …
Project: Research
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ASDC_Sub: Futian Research Project: Using DNA Methylation for Acute Myeloid Leukemia Subtyping
LI, R. (Principal Investigator / Project Coordinator) & ZHANG, L. (Co-Investigator)
1/04/24 → …
Project: Research
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ECS: Towards A Better Understanding of rDNA in Caenorhabditis Species Using Long-Read Sequencing
LI, R. (Principal Investigator / Project Coordinator)
1/01/22 → …
Project: Research
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HMRF: Subtyping CN-AML with Modification Biomarkers Using Nanopore Sequencing
LI, R. (Principal Investigator / Project Coordinator) & Leung, A. Y. H. (Co-Investigator)
1/11/21 → …
Project: Research
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GDBAB-NSF-HK: 使用長讀段轉錄本測序技術研究綫蟲雜交的核質不親和性
LI, R. (Principal Investigator / Project Coordinator)
1/01/21 → …
Project: Research