LIN Jiecong (林捷聰)

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Research Output

  1. 2023
  2. Online published

    MotifHub: Detection of trans-acting DNA motif group with probabilistic modeling algorithm

    Liu, Z., Wong, H., Chen, X., Lin, J., Zhang, S., Yan, S., Wang, F., & 2 othersLi, X. & Wong, K., Jan 2024, In: Computers in Biology and Medicine. 168, 107753.

    Research output: Journal Publications and Reviews (RGC: 21, 22, 62) › 21_Publication in refereed journal › peer-review

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  3. Published

    A Lightweight Framework For Chromatin Loop Detection at the Single-Cell Level

    Wang, F., Alinejad-Rokny, H., Lin, J., Gao, T., Chen, X., Zheng, Z., Meng, L., & 2 othersLi, X. & Wong, K., 24 Nov 2023, In: Advanced Science. 10, 33, 2303502.

    Research output: Journal Publications and Reviews (RGC: 21, 22, 62) › 21_Publication in refereed journal › peer-review

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  4. Published

    Review of single-cell RNA-seq data clustering for cell-type identification and characterization

    ZHANG, S., LI, X., LIN, J., LIN, Q. & WONG, K., May 2023, In: RNA. 29, 5, p. 517-530

    Research output: Journal Publications and Reviews (RGC: 21, 22, 62) › 21_Publication in refereed journal › peer-review

    Scopus citations: 3
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  5. 2022
  6. Published

    GILoop: Robust chromatin loop calling across multiple sequencing depths on Hi-C data

    Wang, F., Gao, T., Lin, J., Zheng, Z., Huang, L., Toseef, M., Li, X., & 1 othersWong, K., 22 Dec 2022, In: iScience. 25, 12, 105535.

    Research output: Journal Publications and Reviews (RGC: 21, 22, 62) › 21_Publication in refereed journal › peer-review

    Scopus citations: 3
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  7. Published

    CoaDTI: multi-modal co-attention based framework for drug-target interaction annotation

    Huang, L., Lin, J., Liu, R., Zheng, Z., Meng, L., Chen, X., Li, X., & 1 othersWong, K., Nov 2022, In: Briefings in Bioinformatics. 23, 6, bbac446.

    Research output: Journal Publications and Reviews (RGC: 21, 22, 62) › 21_Publication in refereed journal › peer-review

    Scopus citations: 6
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  8. Published

    View analysis of personal information leakage and privacy protection in big data era—based on Q method

    Huang, L., Zhou, J., Lin, J. & Deng, S., 5 Sept 2022, In: Aslib Journal of Information Management. 74, 5, p. 901-927 27 p.

    Research output: Journal Publications and Reviews (RGC: 21, 22, 62) › 21_Publication in refereed journal › peer-review

    Scopus citations: 3
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  9. Online published

    An Artificial Intelligence Approach for Gene Editing Off-Target Quantification: Convolutional Self-attention Neural Network Designs and Considerations

    Lin, J., Chen, X. & Wong, K., 5 Jul 2022, (Online published) In: Statistics in Biosciences. 12 p.

    Research output: Journal Publications and Reviews (RGC: 21, 22, 62) › 21_Publication in refereed journal › peer-review

    Scopus citations: 1
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  10. Published

    DeepMotifSyn: a deep learning approach to synthesize heterodimeric DNA motifs

    Lin, J., Huang, L., Chen, X., Zhang, S. & Wong, K., Jan 2022, In: Briefings in Bioinformatics. 23, 1, 9 p., bbab334.

    Research output: Journal Publications and Reviews (RGC: 21, 22, 62) › 21_Publication in refereed journal › peer-review

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  11. Published

    EGFI: drug-drug interaction extraction and generation with fusion of enriched entity and sentence information

    Huang, L., Lin, J., Li, X., Song, L., Zheng, Z. & Wong, K., Jan 2022, In: Briefings in Bioinformatics. 23, 1, bbab451.

    Research output: Journal Publications and Reviews (RGC: 21, 22, 62) › 21_Publication in refereed journal › peer-review

    Scopus citations: 10
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  12. 2021
  13. Published

    Deep Neural Networks for Epistatic Sequence Analysis

    Lin, J., 2021, Epistasis: Methods and Protocols. Wong, K. (ed.). New York, NY: Humana Press, p. 277-289 (Methods in Molecular Biology; vol. 2212).

    Research output: Chapters, Conference Papers, Creative and Literary Works (RGC: 12, 32, 41, 45) › 12_Chapter in an edited book (Author) › peer-review

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  14. Published

    Feature Selection and Feature Extraction: Highlights

    Wong, H., Chen, X., Tam, H., Lin, J., Zhang, S., Yan, S., Li, X., & 1 othersWong, K., 2021, ISMSI 2021: 2021 5th International Conference on Intelligent Systems, Metaheuristics and Swarm Intelligence. Association for Computing Machinery, p. 49-53 (ACM International Conference Proceeding Series).

    Research output: Chapters, Conference Papers, Creative and Literary Works (RGC: 12, 32, 41, 45) › 32_Refereed conference paper (with host publication) › peer-review

    Scopus citations: 2
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  15. 2020
  16. Published

    CRISPR‐Net: A Recurrent Convolutional Network Quantifies CRISPR Off‐Target Activities with Mismatches and Indels

    Lin, J., Zhang, Z., Zhang, S., Chen, J. & Wong, K., Jul 2020, In: Advanced Science. 7, 13, p. 1903562

    Research output: Journal Publications and Reviews (RGC: 21, 22, 62) › 21_Publication in refereed journal › peer-review

    Scopus citations: 24
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  17. Published

    Uncovering the key dimensions of high-throughput biomolecular data using deep learning

    Zhang, S., Li, X., Lin, Q., Lin, J. & Wong, K., 4 Jun 2020, In: Nucleic Acids Research. 48, 10, p. e56

    Research output: Journal Publications and Reviews (RGC: 21, 22, 62) › 21_Publication in refereed journal › peer-review

    Scopus citations: 9
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  18. 2019
  19. Published

    Early Cancer Detection from Multianalyte Blood Test Results

    Wong, K., Chen, J., Zhang, J., Lin, J., Yan, S., Zhang, S., Li, X., & 5 othersLiang, C., Peng, C., Lin, Q., Kwong, S. & Yu, J., 31 May 2019, In: iScience. 15, p. 332-341 9 p.

    Research output: Journal Publications and Reviews (RGC: 21, 22, 62) › 21_Publication in refereed journal › peer-review

    Scopus citations: 18
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  20. Published

    Heterodimeric DNA motif synthesis and validations

    Wong, K., Lin, J., Li, X., Lin, Q., Liang, C. & Song, Y., 28 Feb 2019, In: Nucleic Acids Research. 47, 4, p. 1628-1636

    Research output: Journal Publications and Reviews (RGC: 21, 22, 62) › 21_Publication in refereed journal › peer-review

    Scopus citations: 3
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  21. 2018
  22. Published

    Off-target predictions in CRISPR-Cas9 gene editing using deep learning

    Lin, J. & Wong, K., Sept 2018, In: Bioinformatics. 34, 17, p. i656-i663

    Research output: Journal Publications and Reviews (RGC: 21, 22, 62) › 21_Publication in refereed journal › peer-review

    Scopus citations: 98
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