Dr. CHEN Jiaxing (陳佳星)

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Research Output

  1. 2025
  2. Published

    MEGA-GO: functions prediction of diverse protein sequence length using Multi-scalE Graph Adaptive neural network

    Lee, Y. (Co-first Author), Gao, P. (Co-first Author), Xu, Y., Wang, Z., Li, S. & Chen, J., Feb 2025, In: Bioinformatics. 41, 2, btaf032.

    Research output: Journal Publications and Reviews › RGC 21 - Publication in refereed journal › peer-review

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  3. 2023
  4. Published

    Correction: On triangle inequalities of correlation-based distances for gene expression profiles

    Chen, J., Ng, Y. K., Lin, L., Zhang, X. & Li, S., 2023, In: BMC Bioinformatics. 23, Suppl 3, 571.

    Research output: Journal Publications and Reviews › Erratum

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  5. Published

    On triangle inequalities of correlation-based distances for gene expression profiles

    Chen, J., Ng, Y. K., Lin, L., Zhang, X. & Li, S., 2023, In: BMC Bioinformatics. 24, 40.

    Research output: Journal Publications and Reviews › RGC 21 - Publication in refereed journal › peer-review

    Scopus citations: 5
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  6. 2022
  7. Published

    Both simulation and sequencing data reveal coinfections with multiple SARS-CoV-2 variants in the COVID-19 pandemic

    Li, Y., Jiang, Y., Li, Z., Yu, Y., Chen, J., Jia, W. & Kaow Ng, Y. & 3 others, Ye, F., Cheng Li, S. & Shen, B., 2022, In: Computational and Structural Biotechnology Journal. 20, p. 1389-1401

    Research output: Journal Publications and Reviews › RGC 21 - Publication in refereed journal › peer-review

    Scopus citations: 7
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  8. 2021
  9. Published

    The genome variation and developmental transcriptome maps reveal genetic differentiation of skeletal muscle in pigs

    Yang, Y., Yan, J., Fan, X., Chen, J., Wang, Z., Liu, X. & Yi, G. & 7 others, Liu, Y., Niu, Y., Zhang, L., Wang, L., Li, S., Li, K. & Tang, Z., Nov 2021, In: PLoS Genetics. 17, 11, e1009910.

    Research output: Journal Publications and Reviews › RGC 21 - Publication in refereed journal › peer-review

    Scopus citations: 22
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  10. Published

    Association between metabolic status and gut microbiome in obese populations

    Zeng, Q. (Co-first Author), Yang, Z. (Co-first Author), Wang, F. (Co-first Author), Li, D. (Co-first Author), Liu, Y. (Co-first Author), Wang, D. & Zhao, X. & 13 others, Li, Y., Wang, Y., Feng, X., Chen, J., Li, Y., Zheng, Y., Kenney, T., Gu, H., Feng, S., Li, S., He, Y., Xu, X. & Dai, W., 2021, In: Microbial Genomics. 7, 8, 000639.

    Research output: Journal Publications and Reviews › RGC 21 - Publication in refereed journal › peer-review

    Scopus citations: 16
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  11. 2020
  12. Published

    Deep learning for HGT insertion sites recognition

    Li, C., Chen, J. & Li, S. C., 2020, In: BMC Genomics. 21, Supplement 11, 893.

    Research output: Journal Publications and Reviews › RGC 21 - Publication in refereed journal › peer-review

    Scopus citations: 3
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  13. Published

    Understanding Horizontal Gene Transfer network in human gut microbiota

    Li, C. (Co-first Author), Chen, J. (Co-first Author) & Li, S. C., 2020, In: Gut Pathogens. 12, 33.

    Research output: Journal Publications and Reviews › RGC 21 - Publication in refereed journal › peer-review

    Scopus citations: 25
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  14. 2019
  15. Published

    Discrepant gut microbiota markers for the classification of obesity-related metabolic abnormalities

    Zeng, Q. (Co-first Author), Li, D. (Co-first Author), He, Y. (Co-first Author), Li, Y. (Co-first Author), Yang, Z. (Co-first Author), Zhao, X. & Liu, Y. & 17 others, Wang, Y., Sun, J., Feng, X., Wang, F., Chen, J., Zheng, Y., Yang, Y., Sun, X., Xu, X., Wang, D., Kenney, T., Jiang, Y., Gu, H., Li, Y., Zhou, K., Li, S. & Dai, W., 2019, In: Scientific Reports. 9, 13424.

    Research output: Journal Publications and Reviews › RGC 21 - Publication in refereed journal › peer-review

    Scopus citations: 292
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  16. 2018
  17. Published

    KDiamend: a package for detecting key drivers in a molecular ecological network of disease

    Lyu, M., Chen, J., Jiang, Y., Dong, W., Fang, Z. & Li, S., 2018, In: BMC Systems Biology. 12, Suppl 1, 5.

    Research output: Journal Publications and Reviews › RGC 21 - Publication in refereed journal › peer-review

    Scopus citations: 4
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  18. 2017
  19. Published

    More accurate models for detecting gene-gene interactions from public expression compendia

    Zhang, L., Chen, J. X. & Li, S., 17 Jan 2017, Proceedings - 2016 IEEE International Conference on Bioinformatics and Biomedicine, BIBM 2016. Institute of Electrical and Electronics Engineers, Inc., p. 1871-1878 7822804

    Research output: Chapters, Conference Papers, Creative and Literary Works › RGC 32 - Refereed conference paper (with host publication) › peer-review

    Scopus citations: 2
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  20. 2015
  21. Published

    Parameterized BLOSUM matrices for protein alignment

    Song, D., Chen, J., Chen, G., Li, N., Li, J., Fan, J. & Bu, D. & 1 others, Li, S. C., May 2015, In: IEEE/ACM Transactions on Computational Biology and Bioinformatics. 12, 3, p. 686-694

    Research output: Journal Publications and Reviews › RGC 21 - Publication in refereed journal › peer-review

    Scopus citations: 24
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