Personal profile
Author IDs
ORCID iD: 0000-0002-8148-4574
Expertise related to UN Sustainable Development Goals
In 2015, UN member states agreed to 17 global Sustainable Development Goals (SDGs) to end poverty, protect the planet and ensure prosperity for all. This person’s work contributes towards the following SDG(s):
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SDG 3 Good Health and Well-being -
SDG 6 Clean Water and Sanitation
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Collaborations from the last five years
Research output
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Unraveling the activity of phage-carrying antibiotic resistance genes in constructed wetlands
Zhao, Q., Wang, D., Lin, H., Zhou, T., Zhang, J., Shang, J., Cai, D., Sun, Y., Hu, Z. & Zhang, J., 2026, In: Frontiers in cellular and infection microbiology. 16, 15 p., 1764958.Research output: Journal Publications and Reviews › RGC 21 - Publication in refereed journal › peer-review
Open AccessFile -
From genomic signals to prediction tools: a critical feature analysis and rigorous benchmark for phage–host prediction
Shang, J., Peng, C., Guan, J., Cai, D., Wang, D. & Sun, Y., Nov 2025, In: Briefings in Bioinformatics. 26, 6, 16 p., bbaf626.Research output: Journal Publications and Reviews › RGC 21 - Publication in refereed journal › peer-review
Open AccessFile3 Downloads (CityUHK Scholars) -
PVGA: a precise viral genome assembler using an iterative alignment graph
Song, Z., Cai, D., Sun, Y. & Wang, L., 2025, In: GigaScience. 14, giaf063.Research output: Journal Publications and Reviews › RGC 21 - Publication in refereed journal › peer-review
Open AccessFile1 Link opens in a new tab Citation (Scopus)12 Downloads (CityUHK Scholars) -
Accurate and efficient protein embedding using multi-teacher distillation learning
Shang, J., Peng, C., Ji, Y., Guan, J., Cai, D., Tang, X. & Sun, Y., Sept 2024, In: Bioinformatics. 40, 9, btae567.Research output: Journal Publications and Reviews › RGC 21 - Publication in refereed journal › peer-review
Open AccessFile2 Link opens in a new tab Citations (Scopus)21 Downloads (CityUHK Scholars) -
Towards more accurate microbial source tracking via non-negative matrix factorization (NMF)
Huang, Z. (Co-first Author), Cai, D. (Co-first Author) & Sun, Y., Jul 2024, ISMB 2024 Proceedings. Oxford University Press, p. i68-i78 (Bioinformatics; vol. 40, no. Supplement_1).Research output: Chapters, Conference Papers, Creative and Literary Works › RGC 32 - Refereed conference paper (with host publication) › peer-review
Open AccessFile7 Link opens in a new tab Citations (Scopus)60 Downloads (CityUHK Scholars)
Prizes
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Outstanding Academic Performance Award for Research Degree Students (non-local UGC-funded students)
CAI, D. (Recipient), 16 Aug 2022
Prize: RGC 64B - Prizes and awards
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HKSAR Government Scholarship Fund (Non-academic Awards) - Talent Development Scholarship
CAI, D. (Recipient), 16 Aug 2022
Prize: RGC 64B - Prizes and awards
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Thesis
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Exploring RNA Virus Diversity: Computational Methods for Viral Strains Analysis
CAI, D. (Author), SUN, Y. (Supervisor), 12 May 2025Student thesis: Doctoral Thesis