PENG Cheng (彭誠)

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Research Output

  1. 2025
  2. Published

    GOPhage: protein function annotation for bacteriophages by integrating the genomic context

    Guan, J., Ji, Y., Peng, C., Zou, W., Tang, X., Shang, J. & Sun, Y., Jan 2025, In: Briefings in Bioinformatics. 26, 1, bbaf014.

    Research output: Journal Publications and Reviews › RGC 21 - Publication in refereed journal › peer-review

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  3. 2024
  4. Published

    ViraLM: empowering virus discovery through the genome foundation model

    Peng, C. (Co-first Author), Shang, J. (Co-first Author), Guan, J., Wang, D. & Sun, Y., Dec 2024, In: Bioinformatics. 40, 12, btae704.

    Research output: Journal Publications and Reviews › RGC 21 - Publication in refereed journal › peer-review

    Scopus citations: 1
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  5. Published

    Accurate and efficient protein embedding using multi-teacher distillation learning

    Shang, J., Peng, C., Ji, Y., Guan, J., Cai, D., Tang, X. & Sun, Y., Sept 2024, In: Bioinformatics. 40, 9, btae567.

    Research output: Journal Publications and Reviews › RGC 21 - Publication in refereed journal › peer-review

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  6. 2023
  7. Published

    PhaGenus: genus-level classification of bacteriophages using a Transformer model

    Guan, J., Peng, C., Shang, J., Tang, X. & Sun, Y., Nov 2023, In: Briefings in Bioinformatics. 24, 6, bbad408.

    Research output: Journal Publications and Reviews › RGC 21 - Publication in refereed journal › peer-review

    Scopus citations: 5
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  8. Published

    PhaVIP: Phage VIrion Protein classification based on chaos game representation and Vision Transformer

    Shang, J., Peng, C., Tang, X. & Sun, Y., Jun 2023, ISMB/ECCB 2023 Proceedings. Oxford University Press, p. i30-i39 (Bioinformatics; vol. 39, no. Supplement_1).

    Research output: Chapters, Conference Papers, Creative and Literary Works › RGC 32 - Refereed conference paper (with host publication) › peer-review

    Scopus citations: 5
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  9. Published

    PhaBOX: A web server for identifying and characterizing phage contigs in metagenomic data

    Shang, J., Peng, C., Liao, H., Tang, X. & Sun, Y., 2023, In: Bioinformatics Advances. 3, 1, vbad101.

    Research output: Journal Publications and Reviews › RGC 21 - Publication in refereed journal › peer-review

    Scopus citations: 35
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  10. 2022
  11. Published

    Phage family classification under Caudoviricetes: A review of current tools using the latest ICTV classification framework

    Zhu, Y., Shang, J., Peng, C. & Sun, Y., 2022, In: Frontiers in Microbiology. 13, 1032186.

    Research output: Journal Publications and Reviews › RGC 21 - Publication in refereed journal › peer-review

    Scopus citations: 62
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