Briefings in Bioinformatics
Briefings in Bioinformatics
ISSNs: 1467-5463, 1477-4054
Oxford University Press, United Kingdom
Scopus rating (2023): CiteScore 13.2 SJR 2.143 SNIP 1.497
Journal
Research Output
- 2025
- Published
Comprehensive human respiratory genome catalogue underlies the high resolution and precision of the respiratory microbiome
Li, Y., Pan, G., Wang, S., Li, Z., Yang, R., Jiang, Y. & Chen, Y. & 2 others, , Jan 2025, In: Briefings in Bioinformatics. 26, 1, bbae620.Research output: Journal Publications and Reviews › RGC 21 - Publication in refereed journal › peer-review
- 2024
- Published
CMTT-JTracker: a fully test-time adaptive framework serving automated cell lineage construction
Chen, L., Fu, S. & Zhang, Z., Nov 2024, In: Briefings in Bioinformatics. 25, 6, bbae591.Research output: Journal Publications and Reviews › RGC 21 - Publication in refereed journal › peer-review
- Published
Optimized patient-specific immune checkpoint inhibitor therapies for cancer treatment based on tumor immune microenvironment modeling
Yao, Y., Chen, Y. F. & Zhang, Q., Nov 2024, In: Briefings in Bioinformatics. 25, 6, 10 p., bbae547.Research output: Journal Publications and Reviews › RGC 21 - Publication in refereed journal › peer-review
- Published
SELF-Former: multi-scale gene filtration transformer for single-cell spatial reconstruction
Chen, T., Wei, X., Xie, L., Zhang, Y., Liu, C., Shen, W. & Wu, S. & 1 others, , Nov 2024, In: Briefings in Bioinformatics. 25, 6, 13 p., bbae523.Research output: Journal Publications and Reviews › RGC 21 - Publication in refereed journal › peer-review
- Published
DeepGRNCS: deep learning-based framework for jointly inferring gene regulatory networks across cell subpopulations
Lei, Y., Huang, X.-T., Guo, X., Chan, K. H. K. & Gao, L., Jul 2024, In: Briefings in Bioinformatics. 25, 4, bbae334.Research output: Journal Publications and Reviews › RGC 21 - Publication in refereed journal › peer-review
Scopus citations: 1 - Published
Detecting tipping points of complex diseases by network information entropy
Lyu, C., Chen, L. & Liu, X., Jul 2024, In: Briefings in Bioinformatics. 25, 4, bbae311.Research output: Journal Publications and Reviews › RGC 21 - Publication in refereed journal › peer-review
- Published
TP-LMMSG: a peptide prediction graph neural network incorporating flexible amino acid property representation
Chen, N., Yu, J., Liu, Z., Wang, F., Li, X. & Wong, K.-C., Jul 2024, In: Briefings in Bioinformatics. 25, 4, bbae308.Research output: Journal Publications and Reviews › RGC 21 - Publication in refereed journal › peer-review
Scopus citations: 1 - Published
Utilizing profile hidden Markov model databases for discovering viruses from metagenomic data: a comprehensive review
Yu, R., Huang, Z., Lam, T. Y. C. & Sun, Y., Jul 2024, In: Briefings in Bioinformatics. 25, 4, bbae292.Research output: Journal Publications and Reviews › RGC 21 - Publication in refereed journal › peer-review
Scopus citations: 1 - Published
TransPTM: A transformer-based model for non-histone acetylation site prediction
Meng, L., Chen, X., Cheng, K., Chen, N., Zheng, Z., Wang, F. & Sun, H. & 1 others, , May 2024, In: Briefings in Bioinformatics. 25, 3, 10 p., bbae219.Research output: Journal Publications and Reviews › RGC 21 - Publication in refereed journal › peer-review
Scopus citations: 3 - Published
Deep reinforcement learning identifies personalized intermittent androgen deprivation therapy for prostate cancer
Lu, Y., Chu, Q., Li, Z., Wang, M., Gatenby, R. & Zhang, Q., Mar 2024, In: Briefings in Bioinformatics. 25, 2, 12 p., bbae071.Research output: Journal Publications and Reviews › RGC 21 - Publication in refereed journal › peer-review
Scopus citations: 1 - Published
Elevated incidence of somatic mutations at prevalent genetic sites
Wang, M., Li, S. C. & Shen, B., Mar 2024, In: Briefings in Bioinformatics. 25, 2, bbae065.Research output: Journal Publications and Reviews › RGC 21 - Publication in refereed journal › peer-review
Scopus citations: 1 - 2023
- Published
PhaGenus: genus-level classification of bacteriophages using a Transformer model
Guan, J., Peng, C., Shang, J., Tang, X. & Sun, Y., Nov 2023, In: Briefings in Bioinformatics. 24, 6, bbad408.Research output: Journal Publications and Reviews › RGC 21 - Publication in refereed journal › peer-review
Scopus citations: 2 - Published
HMMPolish: a coding region polishing tool for TGS-sequenced RNA viruses
Yu, R., Abdullah, S. M. U. & Sun, Y., Sept 2023, In: Briefings in Bioinformatics. 24, 5, bbad264.Research output: Journal Publications and Reviews › RGC 21 - Publication in refereed journal › peer-review
- Published
DCiPatho: deep cross-fusion networks for genome scale identification of pathogens
Jiang, G., Zhang, J., Zhang, Y., Yang, X., Li, T., Wang, N. & Chen, X. & 5 others, , Jul 2023, In: Briefings in Bioinformatics. 24, 4, bbad194.Research output: Journal Publications and Reviews › RGC 21 - Publication in refereed journal › peer-review
Scopus citations: 9 - Published
DeepAlgPro: an interpretable deep neural network model for predicting allergenic proteins
He, C., Ye, X., Yang, Y., Hu, L., Si, Y., Zhao, X. & Chen, L. & 4 others, , Jul 2023, In: Briefings in Bioinformatics. 24, 4, bbad246.Research output: Journal Publications and Reviews › RGC 21 - Publication in refereed journal › peer-review
Scopus citations: 10 - Published
Deep transfer learning for clinical decision-making based on high-throughput data: comprehensive survey with benchmark results
Toseef, M., Petinrin, O. O., Wang, F., Rahaman, S., Liu, Z., LI, X. & WONG, K.-C., Jul 2023, In: Briefings in Bioinformatics. 24, 4, bbad254.Research output: Journal Publications and Reviews › RGC 21 - Publication in refereed journal › peer-review
Scopus citations: 8 - Published
SC-AIR-BERT: a pre-trained single-cell model for predicting the antigen-binding specificity of the adaptive immune receptor
Zhao, Y., Su, X., Zhang, W., Mai, S., Qin, C., Yu, R. & He, B. & 1 others, , Jul 2023, In: Briefings in Bioinformatics. 24, 4, bbad191.Research output: Journal Publications and Reviews › RGC 21 - Publication in refereed journal › peer-review
Scopus citations: 4 - Published
Quantitative annotations of T-Cell repertoire specificity
Luo, J., Wang, X., Zou, Y., Chen, L., Liu, W., Zhang, W. & Li, S. C., May 2023, In: Briefings in Bioinformatics. 24, 3, bbad175.Research output: Journal Publications and Reviews › RGC 21 - Publication in refereed journal › peer-review
Scopus citations: 3 - Published
Deep autoregressive generative models capture the intrinsics embedded in T-cell receptor repertoires
Jiang, Y. & Li, S. C., Mar 2023, In: Briefings in Bioinformatics. 24, 2, bbad038.Research output: Journal Publications and Reviews › RGC 21 - Publication in refereed journal › peer-review
Scopus citations: 2 - Published
IMperm: a fast and comprehensive IMmune Paired-End Reads Merger for sequencing data
Zhang, W., Ju, J., Zhou, Y., Xiong, T., Wang, M., Li, C. & Lu, S. & 4 others, , Mar 2023, In: Briefings in Bioinformatics. 24, 2, 10 p., bbad080.Research output: Journal Publications and Reviews › RGC 21 - Publication in refereed journal › peer-review
