Briefings in Bioinformatics

Briefings in Bioinformatics

ISSNs: 1467-5463, 1477-4054

Oxford University Press, United Kingdom

Scopus rating (2021): CiteScore 11.6 SJR 3.032 SNIP 3.293

Journal

Journal Metrics

Research Output

  1. 2022
  2. Published

    Accurate identification of bacteriophages from metagenomic data using Transformer

    Shang, J., Tang, X., Guo, R. & Sun, Y., Jul 2022, In: Briefings in Bioinformatics. 23, 4, bbac258.

    Research output: Journal Publications and Reviews (RGC: 21, 22, 62)21_Publication in refereed journalpeer-review

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  3. Online published

    CHERRY: a Computational metHod for accuratE pRediction of virus–pRokarYotic interactions using a graph encoder–decoder model

    Shang, J. & Sun, Y., 21 May 2022, (Online published) In: Briefings in Bioinformatics. 16 p., bbac182.

    Research output: Journal Publications and Reviews (RGC: 21, 22, 62)21_Publication in refereed journalpeer-review

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  4. Published

    Reducing healthcare disparities using multiple multiethnic data distributions with fine-tuning of transfer learning

    Toseef, M., Li, X. & Wong, K., May 2022, In: Briefings in Bioinformatics. 23, 3, bbac078.

    Research output: Journal Publications and Reviews (RGC: 21, 22, 62)21_Publication in refereed journalpeer-review

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  5. Published

    HCRNet: High-throughput circRNA-binding event identification from CLIP-seq data using deep temporal convolutional network

    Yang, Y., Hou, Z., Wang, Y., Ma, H., Sun, P., Ma, Z., Wong, K. & 1 others, Li, X., Mar 2022, In: Briefings in Bioinformatics. 23, 2, bbac027.

    Research output: Journal Publications and Reviews (RGC: 21, 22, 62)21_Publication in refereed journalpeer-review

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  6. Published

    Proteoform identification based on top-down tandem mass spectra with peak error corrections

    Zhan, Z. & Wang, L., Mar 2022, In: Briefings in Bioinformatics. 23, 2, bbab599.

    Research output: Journal Publications and Reviews (RGC: 21, 22, 62)21_Publication in refereed journalpeer-review

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  7. Published

    RdRp-based sensitive taxonomic classification of RNA viruses for metagenomic data

    Tang, X., Shang, J. & Sun, Y., Mar 2022, In: Briefings in Bioinformatics. 23, 2, bbac011.

    Research output: Journal Publications and Reviews (RGC: 21, 22, 62)21_Publication in refereed journalpeer-review

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  8. Published

    DeepHost: phage host prediction with convolutional neural network

    WANG, R., ZHANG, X., WANG, J. & LI, S., Jan 2022, In: Briefings in Bioinformatics. 23, 1, bbab385.

    Research output: Journal Publications and Reviews (RGC: 21, 22, 62)21_Publication in refereed journalpeer-review

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  9. Published

    DeepMotifSyn: a deep learning approach to synthesize heterodimeric DNA motifs

    Lin, J., Huang, L., Chen, X., Zhang, S. & Wong, K., Jan 2022, In: Briefings in Bioinformatics. 23, 1, 9 p., bbab334.

    Research output: Journal Publications and Reviews (RGC: 21, 22, 62)21_Publication in refereed journalpeer-review

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  10. Published

    EGFI: drug-drug interaction extraction and generation with fusion of enriched entity and sentence information

    Huang, L., Lin, J., Li, X., Song, L., Zheng, Z. & Wong, K., Jan 2022, In: Briefings in Bioinformatics. 23, 1, bbab451.

    Research output: Journal Publications and Reviews (RGC: 21, 22, 62)21_Publication in refereed journalpeer-review

    Scopus citations: 1
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  11. Published

    High-throughput single-cell RNA-seq data imputation and characterization with surrogate-assisted automated deep learning

    Li, X., Li, S., Huang, L., Zhang, S. & Wong, K., Jan 2022, In: Briefings in Bioinformatics. 23, 1, bbab368.

    Research output: Journal Publications and Reviews (RGC: 21, 22, 62)21_Publication in refereed journalpeer-review

    Scopus citations: 4
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  12. Published

    scDEA: differential expression analysis in single-cell RNA-sequencing data via ensemble learning

    Li, H., Ou-Yang, L., Zhu, Y., Yan, H. & Zhang, X., Jan 2022, In: Briefings in Bioinformatics. 23, 1

    Research output: Journal Publications and Reviews (RGC: 21, 22, 62)21_Publication in refereed journalpeer-review

    Scopus citations: 1
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  13. Published

    Somatic variant analysis suite: copy number variation clonal visualization online platform for large-scale single-cell genomics

    Chen, L., Qing, Y., Li, R., Li, C., Li, H., Feng, X. & Li, S. C., Jan 2022, In: Briefings in Bioinformatics. 23, 1, bbab452.

    Research output: Journal Publications and Reviews (RGC: 21, 22, 62)21_Publication in refereed journalpeer-review

    Scopus citations: 1
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  14. 2021
  15. Published

    Deep learning model reveals potential risk genes for ADHD, especially Ephrin receptor gene EPHA5

    Liu, L., Feng, X., Li, H., Li, S. C., Qian, Q. & Wang, Y., Nov 2021, In: Briefings in Bioinformatics. 22, 6, bbab207.

    Research output: Journal Publications and Reviews (RGC: 21, 22, 62)21_Publication in refereed journalpeer-review

    Scopus citations: 3
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  16. Published

    Human Host Status Inference from Temporal Microbiome Changes via Recurrent Neural Networks

    Chen, X., Liu, L., Zhang, W., Yang, J. & Wong, K., Nov 2021, In: Briefings in Bioinformatics. 22, 6, 11 p., bbab223.

    Research output: Journal Publications and Reviews (RGC: 21, 22, 62)21_Publication in refereed journalpeer-review

    Scopus citations: 1
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  17. Published

    iDeepSubMito: identification of protein submitochondrial localization with deep learning

    Hou, Z., Yang, Y., Li, H., Wong, K. & Li, X., Nov 2021, In: Briefings in Bioinformatics. 22, 6, bbab288.

    Research output: Journal Publications and Reviews (RGC: 21, 22, 62)21_Publication in refereed journalpeer-review

    Scopus citations: 2
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  18. Published

    Resolving complex structures at oncovirus integration loci with conjugate graph

    Jia, W., Xu, C. & Li, S. C., Nov 2021, In: Briefings in Bioinformatics. 22, 6, bbab359.

    Research output: Journal Publications and Reviews (RGC: 21, 22, 62)21_Publication in refereed journalpeer-review

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  19. Published

    WDNE: an integrative graphical model for inferring differential networks from multi-platform gene expression data with missing values

    Le Ou-Yang, Cai, D., Zhang, X. & Yan, H., Nov 2021, In: Briefings in Bioinformatics. 22, 6, bbab086.

    Research output: Journal Publications and Reviews (RGC: 21, 22, 62)21_Publication in refereed journalpeer-review

    Scopus citations: 1
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  20. Published

    Deep embedded clustering with multiple objectives on scRNA-seq data

    Li, X., Zhang, S. & Wong, K., Sep 2021, In: Briefings in Bioinformatics. 22, 5, bbab090.

    Research output: Journal Publications and Reviews (RGC: 21, 22, 62)21_Publication in refereed journalpeer-review

    Scopus citations: 1
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  21. Published

    Elucidating transcriptomic profiles from single-cell RNA sequencing data using nature-inspired compressed sensing

    Yu, Z., Bian, C., Liu, G., Zhang, S., Wong, K. & Li, X., Sep 2021, In: Briefings in Bioinformatics. 22, 5, bbab125.

    Research output: Journal Publications and Reviews (RGC: 21, 22, 62)21_Publication in refereed journalpeer-review

    Scopus citations: 1
    Check@CityULib
  22. Published

    Identification of haploinsufficient genes from epigenomic data using deep forest

    Yang, Y., Li, S., Wang, Y., Ma, Z., Wong, K. & Li, X., Sep 2021, In: Briefings in Bioinformatics. 22, 5, bbaa393.

    Research output: Journal Publications and Reviews (RGC: 21, 22, 62)21_Publication in refereed journalpeer-review

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