BMC Genomics

BMC Genomics

ISSNs: 1471-2164

BioMed Central Ltd., United Kingdom

Scopus rating (2020): CiteScore 6.4 SJR 1.547 SNIP 1.162

Indexed in DOAJ

Journal

Journal Metrics

Research Output

  1. 2021
  2. Published

    A scaling-free minimum enclosing ball method to detect differentially expressed genes for RNA-seq data

    Zhou, Y., Yang, B., Wang, J., Zhu, J. & Tian, G., 2021, In: BMC Genomics. 22, 479.

    Research output: Journal Publications and Reviews (RGC: 21, 22, 62)21_Publication in refereed journalpeer-review

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  3. Published

    Improving protein domain classification for third-generation sequencing reads using deep learning

    Du, N., Shang, J. & Sun, Y., 2021, In: BMC Genomics. 22, 251.

    Research output: Journal Publications and Reviews (RGC: 21, 22, 62)21_Publication in refereed journalpeer-review

    Scopus citations: 2
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  4. Published

    SCYN: single cell CNV profiling method using dynamic programming

    Feng, X., Chen, L., Qing, Y., Li, R., Li, C. & Li, S. C., 2021, In: BMC Genomics. 22, Supplement 5, 651.

    Research output: Journal Publications and Reviews (RGC: 21, 22, 62)21_Publication in refereed journalpeer-review

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  5. 2020
  6. Published

    Deep learning for HGT insertion sites recognition

    Li, C., Chen, J. & Li, S. C., 2020, In: BMC Genomics. 21, Supplement 11, 893.

    Research output: Journal Publications and Reviews (RGC: 21, 22, 62)21_Publication in refereed journalpeer-review

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  7. Published

    I-Impute: a self-consistent method to impute single cell RNA sequencing data

    Feng, X., Chen, L., Wang, Z. & Li, S. C., 2020, In: BMC Genomics. 21, Suppl. 10, 618.

    Research output: Journal Publications and Reviews (RGC: 21, 22, 62)21_Publication in refereed journalpeer-review

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  8. 2019
  9. Published

    Correction to: Genomic analysis of Leptospira interrogans serovar Paidjan and Dadas isolates from carrier dogs and comparative genomic analysis to detect genes under positive selection

    Kurilung, A., Keeratipusana, C., Suriyaphol, P., Hampson, D. J. & Prapasarakul, N., 2019, In: BMC Genomics. 20, 246.

    Research output: Journal Publications and Reviews (RGC: 21, 22, 62)Erratum

    Scopus citations: 2
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  10. Published

    Genomic analysis of Leptospira interrogans serovar Paidjan and Dadas isolates from carrier dogs and comparative genomic analysis to detect genes under positive selection

    Kurilung, A., Keeratipusana, C., Suriyaphol, P., Hampson, D. J. & Prapasarakul, N., 2019, In: BMC Genomics. 20, 168.

    Research output: Journal Publications and Reviews (RGC: 21, 22, 62)21_Publication in refereed journalpeer-review

    Scopus citations: 4
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  11. Published

    Improving the sensitivity of long read overlap detection using grouped short k-mer matches

    Du, N., Chen, J. & Sun, Y., 2019, In: BMC Genomics. 20, Suppl. 2, 190.

    Research output: Journal Publications and Reviews (RGC: 21, 22, 62)21_Publication in refereed journalpeer-review

    Scopus citations: 2
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  12. Published

    Large-scale 3D chromatin reconstruction from chromosomal contacts

    Zhang, Y., Liu, W., Lin, Y., Ng, Y. K. & Li, S., 2019, In: BMC Genomics. 20, Suppl. 2, 186.

    Research output: Journal Publications and Reviews (RGC: 21, 22, 62)21_Publication in refereed journalpeer-review

    Scopus citations: 4
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  13. 2017
  14. Published

    Core-genome scaffold comparison reveals the prevalence that inversion events are associated with pairs of inverted repeats

    Wang, D., Li, S., Guo, F., Ning, K. & Wang, L., 29 Mar 2017, In: BMC Genomics. 18, 1, 268.

    Research output: Journal Publications and Reviews (RGC: 21, 22, 62)21_Publication in refereed journalpeer-review

    Scopus citations: 5
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  15. 2016
  16. Published

    Reconstructing directed gene regulatory network by only gene expression data

    Zhang, L., Feng, X. K., Ng, Y. K. & Li, S. C., 18 Aug 2016, In: BMC Genomics. 17, 430.

    Research output: Journal Publications and Reviews (RGC: 21, 22, 62)21_Publication in refereed journalpeer-review

    Scopus citations: 8
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  17. COMAN: A web server for comprehensive metatranscriptomics analysis

    Ni, Y., Li, J. & Panagiotou, G., 2016, In: BMC Genomics. 17, 622.

    Research output: Journal Publications and Reviews (RGC: 21, 22, 62)21_Publication in refereed journalpeer-review

    Scopus citations: 14
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  18. 2015
  19. Transcriptomic analysis reveals specific osmoregulatory adaptive responses in gill mitochondria-rich cells and pavement cells of the Japanese eel

    Lai, K. P., Li, J., Gu, J., Chan, T., Tse, W. K. F. & Wong, C. K. C., 18 Dec 2015, In: BMC Genomics. 16, 1, 1072.

    Research output: Journal Publications and Reviews (RGC: 21, 22, 62)21_Publication in refereed journalpeer-review

    Scopus citations: 19
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  20. Published

    Non-thermal plasma treatment altered gene expression profiling in non-small-cell lung cancer A549 cells

    Hou, J., Ma, J., Yu, K. N., Li, W., Cheng, C., Bao, L. & Han, W., 2015, In: BMC Genomics. 16

    Research output: Journal Publications and Reviews (RGC: 21, 22, 62)21_Publication in refereed journalpeer-review

    Scopus citations: 45
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  21. Published

    Tissue-specific transcriptome assemblies of the marine medaka Oryzias melastigma and comparative analysis with the freshwater medaka Oryzias latipes

    Lai, K. P., Li, J., Wang, S. Y., Chiu, J. M., Tse, A., Lau, K., Lok, S. & 6 others, Au, D. W., Tse, W. K., Wong, C. K., Chan, T., Kong, R. Y. & Wu, R. S., 2015, In: BMC Genomics. 16, 1, 135.

    Research output: Journal Publications and Reviews (RGC: 21, 22, 62)21_Publication in refereed journalpeer-review

    Scopus citations: 38
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  22. 2014
  23. Exploring mechanisms of diet-colon cancer associations through candidate molecular interaction networks

    Westergaard, D., Li, J., Jensen, K., Kouskoumvekaki, I. & Panagiotou, G., Dec 2014, In: BMC Genomics. 15, 1, 380.

    Research output: Journal Publications and Reviews (RGC: 21, 22, 62)21_Publication in refereed journalpeer-review

    Scopus citations: 7
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  24. Published

    De novo transcriptome analysis of Perna viridis highlights tissue-specific patterns for environmental studies

    Leung, P. T., Ip, J. C., Mak, S. S., Qiu, J. W., Lam, P. K., Wong, C. K., Chan, L. L. & 1 others, Leung, K. M. Y., 2014, In: BMC Genomics. 15, 804.

    Research output: Journal Publications and Reviews (RGC: 21, 22, 62)21_Publication in refereed journalpeer-review

    Scopus citations: 31
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  25. Published

    Spectral probabilities of top-down tandem mass spectra

    Liu, X., Segar, M. W., Li, S. C. & Kim, S., 2014, In: BMC Genomics. 15, Supplement 1

    Research output: Journal Publications and Reviews (RGC: 21, 22, 62)21_Publication in refereed journalpeer-review

    Scopus citations: 12
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  26. 2013
  27. Published

    A highly accurate heuristic algorithm for the haplotype assembly problem.

    Deng, F., Cui, W. & Wang, L., 2013, In: BMC Genomics. 14 Suppl 2, S2.

    Research output: Journal Publications and Reviews (RGC: 21, 22, 62)21_Publication in refereed journalpeer-review

    Scopus citations: 26
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  28. 2012
  29. Comparative genomics of Brachyspira pilosicoli strains: Genome rearrangements, reductions and correlation of genetic compliment with phenotypic diversity

    Mappley, L. J., Black, M. L., AbuOun, M., Darby, A. C., Woodward, M. J., Parkhill, J., Turner, A. K. & 5 others, Bellgard, M. I., La, T., Phillips, N. D., La Ragione, R. M. & Hampson, D. J., 5 Sep 2012, In: BMC Genomics. 13, 1, 454.

    Research output: Journal Publications and Reviews (RGC: 21, 22, 62)21_Publication in refereed journalpeer-review

    Scopus citations: 27
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