Bioinformatics

Bioinformatics

ISSNs: 1367-4803

OXFORD UNIV PRESS, United Kingdom

Scopus rating (2016): CiteScore 6.42

Journal

Research Output

  1. 2017
  2. Published

    MotifHyades: Expectation Maximization for de novo DNA Motif Pair Discovery on Paired Sequences

    WONG, K. C. Jun 2017 In : Bioinformatics.

    Research output: Journal Publications and Reviews (RGC: 21, 22, 62)21_Publication in refereed journal

  3. Published

    NSSRF: Global network similarity search with subgraph signatures and its applications

    Zhang, J., Kwong, S., Jia, Y. & Wong, K. Jun 2017 In : Bioinformatics. 33, 11, p. 1696-1702

    Research output: Journal Publications and Reviews (RGC: 21, 22, 62)21_Publication in refereed journal

  4. Published

    Inference of cellular level signaling networks using single-cell gene expression data in Caenorhabditis elegans reveals mechanisms of cell fate specification

    HUANG, X., Zhu, Y., CHAN, L. H. L., Zhao, Z. & Yan, H. 15 May 2017 In : Bioinformatics. btw796

    Research output: Journal Publications and Reviews (RGC: 21, 22, 62)21_Publication in refereed journal

  5. Published

    FoldAtlas: a repository for genome-wide RNA structure probing data

    Norris, M., Kwok, C. K., Cheema, J., Hartley, M., Morris, R. J., Aviran, S. & Ding, Y. 15 Jan 2017 In : Bioinformatics. 33, 2, p. 306-308

    Research output: Journal Publications and Reviews (RGC: 21, 22, 62)21_Publication in refereed journal

  6. 2015
  7. Published

    FALCON: A high-throughput protein structure prediction server based on remote homologue recognition

    Wang, C., Zhang, H., Zheng, W-M., Xu, D., Zhu, J., Wang, B., Ning, K., Sun, S., Li, S. C. & Bu, D. 23 Apr 2015 In : Bioinformatics. 32, 3, p. 462-464

    Research output: Journal Publications and Reviews (RGC: 21, 22, 62)21_Publication in refereed journal

    Scopus citations: 5
  8. Published

    Identification of coupling DNA motif pairs on long-range chromatin interactions in human K562 cells

    Wong, K., Li, Y. & Peng, C. 23 Apr 2015 In : Bioinformatics. 32, 3, p. 321-324

    Research output: Journal Publications and Reviews (RGC: 21, 22, 62)21_Publication in refereed journal

    Scopus citations: 4
  9. Published

    An efficient algorithm for the blocked pattern matching problem

    Deng, F., Wang, L. & Liu, X. 15 Feb 2015 In : Bioinformatics. 31, 4, p. 532-538

    Research output: Journal Publications and Reviews (RGC: 21, 22, 62)21_Publication in refereed journal

    Scopus citations: 1
  10. StructureFold: Genome-wide RNA secondary structure mapping and reconstruction in vivo

    Tang, Y., Bouvier, E., Kwok, C. K., Ding, Y., Nekrutenko, A., Bevilacqua, P. C. & Assmann, S. M. 19 Jan 2015 In : Bioinformatics. 31, 16, p. 2668-2675

    Research output: Journal Publications and Reviews (RGC: 21, 22, 62)21_Publication in refereed journal

    Scopus citations: 12
  11. SignalSpider: Probabilistic pattern discovery on multiple normalized ChIP-Seq signal profiles

    Wong, K., Li, Y., Peng, C. & Zhang, Z. 1 Jan 2015 In : Bioinformatics. 31, 1, p. 17-24

    Research output: Journal Publications and Reviews (RGC: 21, 22, 62)21_Publication in refereed journal

    Scopus citations: 18
  12. 2014
  13. Published

    Fingerprinting protein structures effectively and efficiently

    Cui, X., Li, S. C., He, L. & Li, M. 1 Apr 2014 In : Bioinformatics. 30, 7, p. 949-955

    Research output: Journal Publications and Reviews (RGC: 21, 22, 62)21_Publication in refereed journal

    Scopus citations: 1
  14. A probabilistic approach to explore human miRNA targetome by integrating miRNA-overexpression data and sequence information

    Li, Y., Goldenberg, A., Wong, K. & Zhang, Z. Mar 2014 In : Bioinformatics. 30, 5, p. 621-628

    Research output: Journal Publications and Reviews (RGC: 21, 22, 62)22_Publication in policy or professional journal

    Scopus citations: 11
  15. Published

    Computational identification of protein binding sites on RNAs using high-throughput RNA structure-probing data

    Hu, X., Wong, T. K. F., Lu, Z. J., Chan, T. F., Lau, T. C. K., Yiu, S. M. & Yip, K. Y. 2014 In : Bioinformatics. 30, 8, p. 1049-1055

    Research output: Journal Publications and Reviews (RGC: 21, 22, 62)21_Publication in refereed journal

    Scopus citations: 2
  16. Mirsynergy: Detecting synergistic miRNA regulatory modules by overlapping neighbourhood expansion

    Li, Y., Liang, C., Wong, K., Luo, J. & Zhang, Z. 2014 In : Bioinformatics. 30, 18, p. 2627-2635

    Research output: Journal Publications and Reviews (RGC: 21, 22, 62)21_Publication in refereed journal

    Scopus citations: 21
  17. SNPdryad: Predicting deleterious non-synonymous human SNPs using only orthologous protein sequences

    Wong, K. & Zhang, Z. 2014 In : Bioinformatics. 30, 8, p. 1112-1119

    Research output: Journal Publications and Reviews (RGC: 21, 22, 62)21_Publication in refereed journal

    Scopus citations: 26
  18. 2013
  19. Published

    Exact algorithms for haplotype assembly from whole-genome sequence data

    Chen, Z-Z., Deng, F. & Wang, L. 15 Aug 2013 In : Bioinformatics. 29, 16, p. 1938-1945

    Research output: Journal Publications and Reviews (RGC: 21, 22, 62)22_Publication in policy or professional journal

    Scopus citations: 20
  20. 2011
  21. Published

    Feature-based 3D motif filtering for ribosomal RNA

    Shen, Y., Wong, H., Zhang, S. & Yu, Z. Oct 2011 In : Bioinformatics. 27, 20, p. 2828-2835 btr495

    Research output: Journal Publications and Reviews (RGC: 21, 22, 62)22_Publication in policy or professional journal

    Scopus citations: 3
  22. HTSanalyzeR: An R/Bioconductor package for integrated network analysis of high-throughput screens

    Wang, X., Terfve, C., Rose, J. C. & Markowetz, F. Mar 2011 In : Bioinformatics. 27, 6, p. 879-880 btr028

    Research output: Journal Publications and Reviews (RGC: 21, 22, 62)22_Publication in policy or professional journal

    Scopus citations: 38
  23. Discovering approximate-associated sequence patterns for protein-DNA interactions

    Chan, T-M., Wong, K., Lee, K-H., Wong, M-H., Lau, C., Tsui, S. K-W. & Leung, K-S. Feb 2011 In : Bioinformatics. 27, 4, p. 471-478 btq682

    Research output: Journal Publications and Reviews (RGC: 21, 22, 62)22_Publication in policy or professional journal

    Scopus citations: 16
  24. 2010
  25. Published

    HybridNET: A tool for constructing hybridization networks

    Chen, Z-Z. & Wang, L. Nov 2010 In : Bioinformatics. 26, 22, p. 2912-2913 btq548

    Research output: Journal Publications and Reviews (RGC: 21, 22, 62)22_Publication in policy or professional journal

    Scopus citations: 19
  26. Published

    A discriminatory function for prediction of protein-DNA interactions based on alpha shape modeling

    Zhou, W. & Yan, H. 23 Aug 2010 In : Bioinformatics. 26, 20, p. 2541-2548 btq478

    Research output: Journal Publications and Reviews (RGC: 21, 22, 62)22_Publication in policy or professional journal

    Scopus citations: 16
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