Bioinformatics

Bioinformatics

ISSNs: 1367-4803, 0266-7061

Additional searchable ISSN (Electronic): 1367-4811

OXFORD UNIV PRESS, United Kingdom

Scopus rating (2016): CiteScore 6.42 SJR 4.92 SNIP 2.099

Journal

Research Output

  1. 2017
  2. Published

    Matrix completion with side information and its applications in predicting the antigenicity of influenza viruses

    Huang, L., Li, X., Guo, P., Yao, Y., Liao, B., Zhang, W., Wang, F., Yang, J., Zhao, Y., Sun, H., He, P. & Yang, J. 15 Oct 2017 In : Bioinformatics. 33, 20, p. 3195-3201

    Research output: Journal Publications and Reviews (RGC: 21, 22, 62)21_Publication in refereed journal

  3. Published

    MotifHyades: expectation maximization for de novo DNA motif pair discovery on paired sequences

    Wong, K. 1 Oct 2017 In : Bioinformatics. 33, 19, p. 3028-3035

    Research output: Journal Publications and Reviews (RGC: 21, 22, 62)21_Publication in refereed journal

  4. Published

    NSSRF: Global network similarity search with subgraph signatures and its applications

    Zhang, J., Kwong, S., Jia, Y. & Wong, K. Jun 2017 In : Bioinformatics. 33, 11, p. 1696-1702

    Research output: Journal Publications and Reviews (RGC: 21, 22, 62)21_Publication in refereed journal

  5. Published

    Inference of cellular level signaling networks using single-cell gene expression data in Caenorhabditis elegans reveals mechanisms of cell fate specification

    HUANG, X., Zhu, Y., CHAN, L. H. L., Zhao, Z. & Yan, H. 15 May 2017 In : Bioinformatics. btw796

    Research output: Journal Publications and Reviews (RGC: 21, 22, 62)21_Publication in refereed journal

  6. Published

    FoldAtlas: a repository for genome-wide RNA structure probing data

    Norris, M., Kwok, C. K., Cheema, J., Hartley, M., Morris, R. J., Aviran, S. & Ding, Y. 15 Jan 2017 In : Bioinformatics. 33, 2, p. 306-308

    Research output: Journal Publications and Reviews (RGC: 21, 22, 62)21_Publication in refereed journal

  7. 2015
  8. Published

    FALCON: A high-throughput protein structure prediction server based on remote homologue recognition

    Wang, C., Zhang, H., Zheng, W., Xu, D., Zhu, J., Wang, B., Ning, K., Sun, S., Li, S. C. & Bu, D. 23 Apr 2015 In : Bioinformatics. 32, 3, p. 462-464

    Research output: Journal Publications and Reviews (RGC: 21, 22, 62)21_Publication in refereed journal

    Scopus citations: 7
  9. Published

    Identification of coupling DNA motif pairs on long-range chromatin interactions in human K562 cells

    Wong, K., Li, Y. & Peng, C. 23 Apr 2015 In : Bioinformatics. 32, 3, p. 321-324

    Research output: Journal Publications and Reviews (RGC: 21, 22, 62)21_Publication in refereed journal

    Scopus citations: 5
  10. Published

    An efficient algorithm for the blocked pattern matching problem

    Deng, F., Wang, L. & Liu, X. 15 Feb 2015 In : Bioinformatics. 31, 4, p. 532-538

    Research output: Journal Publications and Reviews (RGC: 21, 22, 62)21_Publication in refereed journal

    Scopus citations: 1
  11. StructureFold: Genome-wide RNA secondary structure mapping and reconstruction in vivo

    Tang, Y., Bouvier, E., Kwok, C. K., Ding, Y., Nekrutenko, A., Bevilacqua, P. C. & Assmann, S. M. 19 Jan 2015 In : Bioinformatics. 31, 16, p. 2668-2675

    Research output: Journal Publications and Reviews (RGC: 21, 22, 62)21_Publication in refereed journal

    Scopus citations: 13
  12. SignalSpider: Probabilistic pattern discovery on multiple normalized ChIP-Seq signal profiles

    Wong, K., Li, Y., Peng, C. & Zhang, Z. 1 Jan 2015 In : Bioinformatics. 31, 1, p. 17-24

    Research output: Journal Publications and Reviews (RGC: 21, 22, 62)21_Publication in refereed journal

    Scopus citations: 18
  13. 2014
  14. Published

    Fingerprinting protein structures effectively and efficiently

    Cui, X., Li, S. C., He, L. & Li, M. 1 Apr 2014 In : Bioinformatics. 30, 7, p. 949-955

    Research output: Journal Publications and Reviews (RGC: 21, 22, 62)21_Publication in refereed journal

    Scopus citations: 1
  15. A probabilistic approach to explore human miRNA targetome by integrating miRNA-overexpression data and sequence information

    Li, Y., Goldenberg, A., Wong, K. & Zhang, Z. Mar 2014 In : Bioinformatics. 30, 5, p. 621-628

    Research output: Journal Publications and Reviews (RGC: 21, 22, 62)22_Publication in policy or professional journal

    Scopus citations: 11
  16. Published

    Computational identification of protein binding sites on RNAs using high-throughput RNA structure-probing data

    Hu, X., Wong, T. K. F., Lu, Z. J., Chan, T. F., Lau, T. C. K., Yiu, S. M. & Yip, K. Y. 2014 In : Bioinformatics. 30, 8, p. 1049-1055

    Research output: Journal Publications and Reviews (RGC: 21, 22, 62)21_Publication in refereed journal

    Scopus citations: 2
  17. Mirsynergy: Detecting synergistic miRNA regulatory modules by overlapping neighbourhood expansion

    Li, Y., Liang, C., Wong, K., Luo, J. & Zhang, Z. 2014 In : Bioinformatics. 30, 18, p. 2627-2635

    Research output: Journal Publications and Reviews (RGC: 21, 22, 62)21_Publication in refereed journal

    Scopus citations: 22
  18. SNPdryad: Predicting deleterious non-synonymous human SNPs using only orthologous protein sequences

    Wong, K. & Zhang, Z. 2014 In : Bioinformatics. 30, 8, p. 1112-1119

    Research output: Journal Publications and Reviews (RGC: 21, 22, 62)21_Publication in refereed journal

    Scopus citations: 26
  19. 2013
  20. Published

    Exact algorithms for haplotype assembly from whole-genome sequence data

    Chen, Z., Deng, F. & Wang, L. 15 Aug 2013 In : Bioinformatics. 29, 16, p. 1938-1945

    Research output: Journal Publications and Reviews (RGC: 21, 22, 62)22_Publication in policy or professional journal

    Scopus citations: 20
  21. 2011
  22. Published

    Feature-based 3D motif filtering for ribosomal RNA

    Shen, Y., Wong, H., Zhang, S. & Yu, Z. Oct 2011 In : Bioinformatics. 27, 20, p. 2828-2835 btr495

    Research output: Journal Publications and Reviews (RGC: 21, 22, 62)22_Publication in policy or professional journal

    Scopus citations: 3
  23. HTSanalyzeR: An R/Bioconductor package for integrated network analysis of high-throughput screens

    Wang, X., Terfve, C., Rose, J. C. & Markowetz, F. Mar 2011 In : Bioinformatics. 27, 6, p. 879-880 btr028

    Research output: Journal Publications and Reviews (RGC: 21, 22, 62)22_Publication in policy or professional journal

    Scopus citations: 40
  24. Discovering approximate-associated sequence patterns for protein-DNA interactions

    Chan, T., Wong, K., Lee, K., Wong, M., Lau, C., Tsui, S. K. & Leung, K. Feb 2011 In : Bioinformatics. 27, 4, p. 471-478 btq682

    Research output: Journal Publications and Reviews (RGC: 21, 22, 62)22_Publication in policy or professional journal

    Scopus citations: 16
  25. 2010
  26. Published

    HybridNET: A tool for constructing hybridization networks

    Chen, Z. & Wang, L. Nov 2010 In : Bioinformatics. 26, 22, p. 2912-2913 btq548

    Research output: Journal Publications and Reviews (RGC: 21, 22, 62)22_Publication in policy or professional journal

    Scopus citations: 20
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