Bioinformatics

Bioinformatics

ISSNs: 1367-4803, 0266-7061, 1367-4811

OXFORD UNIV PRESS, United Kingdom

Scopus rating (2017): CiteScore 7.84 SJR 6.14 SNIP 2.52

Journal

Journal Metrics

Research Output

  1. 2018
  2. Published

    Off-target predictions in CRISPR-Cas9 gene editing using deep learning

    Lin, J. & Wong, K., 8 Sep 2018, In : Bioinformatics. 34, 17, p. i656-i663

    Research output: Journal Publications and Reviews (RGC: 21, 22, 62)21_Publication in refereed journalNot applicablepeer-review

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  3. Published

    Progressive approach for SNP calling and haplotype assembly using single molecular sequencing data

    Guo, F., Wang, D. & Wang, L., 15 Jun 2018, In : Bioinformatics. 34, 12, p. 2012-2018

    Research output: Journal Publications and Reviews (RGC: 21, 22, 62)21_Publication in refereed journalNot applicablepeer-review

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  4. Published

    DiffGraph: An R package for identifying gene network rewiring using differential graphical models

    Zhang, X., Ou-Yang, L., Yang, S., Hu, X. & Yan, H., 1 May 2018, In : Bioinformatics. 34, 9, p. 1571-1573

    Research output: Journal Publications and Reviews (RGC: 21, 22, 62)21_Publication in refereed journalNot applicablepeer-review

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  5. 2017
  6. Published

    Improving protein fold recognition by extracting fold-specific features from predicted residue–residue contacts

    Zhu, J., Zhang, H., Li, S. C., Wang, C., Kong, L., Sun, S., Zheng, W. & Bu, D., 1 Dec 2017, In : Bioinformatics. 33, 23, p. 3749-3757

    Research output: Journal Publications and Reviews (RGC: 21, 22, 62)21_Publication in refereed journalNot applicablepeer-review

    Scopus citations: 1
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  7. Published

    Matrix completion with side information and its applications in predicting the antigenicity of influenza viruses

    Huang, L., Li, X., Guo, P., Yao, Y., Liao, B., Zhang, W., Wang, F., Yang, J., Zhao, Y., Sun, H., He, P. & Yang, J., 15 Oct 2017, In : Bioinformatics. 33, 20, p. 3195-3201

    Research output: Journal Publications and Reviews (RGC: 21, 22, 62)21_Publication in refereed journalNot applicablepeer-review

    Scopus citations: 1
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  8. Published

    MotifHyades: expectation maximization for de novo DNA motif pair discovery on paired sequences

    Wong, K., 1 Oct 2017, In : Bioinformatics. 33, 19, p. 3028-3035

    Research output: Journal Publications and Reviews (RGC: 21, 22, 62)21_Publication in refereed journalNot applicablepeer-review

    Scopus citations: 2
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  9. Published

    Incorporating prior information into differential network analysis using non-paranormal graphical models

    Zhang, X., Ou-Yang, L. & Yan, H., 15 Aug 2017, In : Bioinformatics. 33, 16, p. 2436-2445

    Research output: Journal Publications and Reviews (RGC: 21, 22, 62)21_Publication in refereed journalNot applicablepeer-review

    Scopus citations: 2
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  10. Published

    NSSRF: Global network similarity search with subgraph signatures and its applications

    Zhang, J., Kwong, S., Jia, Y. & Wong, K., Jun 2017, In : Bioinformatics. 33, 11, p. 1696-1702

    Research output: Journal Publications and Reviews (RGC: 21, 22, 62)21_Publication in refereed journalNot applicablepeer-review

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  11. Published

    Inference of cellular level signaling networks using single-cell gene expression data in Caenorhabditis elegans reveals mechanisms of cell fate specification

    Huang, X., Zhu, Y., Chan, L. H. L., Zhao, Z. & Yan, H., 15 May 2017, In : Bioinformatics. 33, 10, p. 1528-1535

    Research output: Journal Publications and Reviews (RGC: 21, 22, 62)21_Publication in refereed journalNot applicablepeer-review

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  12. Published

    FoldAtlas: a repository for genome-wide RNA structure probing data

    Norris, M., Kwok, C. K., Cheema, J., Hartley, M., Morris, R. J., Aviran, S. & Ding, Y., 15 Jan 2017, In : Bioinformatics. 33, 2, p. 306-308

    Research output: Journal Publications and Reviews (RGC: 21, 22, 62)21_Publication in refereed journalNot applicablepeer-review

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  13. 2015
  14. Published

    FALCON: A high-throughput protein structure prediction server based on remote homologue recognition

    Wang, C., Zhang, H., Zheng, W., Xu, D., Zhu, J., Wang, B., Ning, K., Sun, S., Li, S. C. & Bu, D., 23 Apr 2015, In : Bioinformatics. 32, 3, p. 462-464

    Research output: Journal Publications and Reviews (RGC: 21, 22, 62)21_Publication in refereed journalNot applicablepeer-review

    Scopus citations: 12
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  15. Published

    Identification of coupling DNA motif pairs on long-range chromatin interactions in human K562 cells

    Wong, K., Li, Y. & Peng, C., 23 Apr 2015, In : Bioinformatics. 32, 3, p. 321-324

    Research output: Journal Publications and Reviews (RGC: 21, 22, 62)21_Publication in refereed journalNot applicablepeer-review

    Scopus citations: 5
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  16. Published

    An efficient algorithm for the blocked pattern matching problem

    Deng, F., Wang, L. & Liu, X., 15 Feb 2015, In : Bioinformatics. 31, 4, p. 532-538

    Research output: Journal Publications and Reviews (RGC: 21, 22, 62)21_Publication in refereed journalNot applicablepeer-review

    Scopus citations: 4
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  17. StructureFold: Genome-wide RNA secondary structure mapping and reconstruction in vivo

    Tang, Y., Bouvier, E., Kwok, C. K., Ding, Y., Nekrutenko, A., Bevilacqua, P. C. & Assmann, S. M., 19 Jan 2015, In : Bioinformatics. 31, 16, p. 2668-2675

    Research output: Journal Publications and Reviews (RGC: 21, 22, 62)21_Publication in refereed journalNot applicablepeer-review

    Scopus citations: 18
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  18. SignalSpider: Probabilistic pattern discovery on multiple normalized ChIP-Seq signal profiles

    Wong, K., Li, Y., Peng, C. & Zhang, Z., 1 Jan 2015, In : Bioinformatics. 31, 1, p. 17-24

    Research output: Journal Publications and Reviews (RGC: 21, 22, 62)21_Publication in refereed journalNot applicablepeer-review

    Scopus citations: 18
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  19. 2014
  20. Published

    Fingerprinting protein structures effectively and efficiently

    Cui, X., Li, S. C., He, L. & Li, M., 1 Apr 2014, In : Bioinformatics. 30, 7, p. 949-955

    Research output: Journal Publications and Reviews (RGC: 21, 22, 62)21_Publication in refereed journalNot applicablepeer-review

    Scopus citations: 2
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  21. A probabilistic approach to explore human miRNA targetome by integrating miRNA-overexpression data and sequence information

    Li, Y., Goldenberg, A., Wong, K. & Zhang, Z., Mar 2014, In : Bioinformatics. 30, 5, p. 621-628

    Research output: Journal Publications and Reviews (RGC: 21, 22, 62)21_Publication in refereed journalNot applicablepeer-review

    Scopus citations: 12
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  22. Published

    Computational identification of protein binding sites on RNAs using high-throughput RNA structure-probing data

    Hu, X., Wong, T. K. F., Lu, Z. J., Chan, T. F., Lau, T. C. K., Yiu, S. M. & Yip, K. Y., 2014, In : Bioinformatics. 30, 8, p. 1049-1055

    Research output: Journal Publications and Reviews (RGC: 21, 22, 62)21_Publication in refereed journalNot applicablepeer-review

    Scopus citations: 2
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  23. Mirsynergy: Detecting synergistic miRNA regulatory modules by overlapping neighbourhood expansion

    Li, Y., Liang, C., Wong, K., Luo, J. & Zhang, Z., 2014, In : Bioinformatics. 30, 18, p. 2627-2635

    Research output: Journal Publications and Reviews (RGC: 21, 22, 62)21_Publication in refereed journalNot applicablepeer-review

    Scopus citations: 34
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  24. SNPdryad: Predicting deleterious non-synonymous human SNPs using only orthologous protein sequences

    Wong, K. & Zhang, Z., 2014, In : Bioinformatics. 30, 8, p. 1112-1119

    Research output: Journal Publications and Reviews (RGC: 21, 22, 62)21_Publication in refereed journalNot applicablepeer-review

    Scopus citations: 37
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